Gene detail information of Glyur000557s00018791.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G23340.10casein kinase I-like 10
NRXP_007223111.10hypothetical protein PRUPE_ppa005419mg [Prunus persica]
COGYP_629724.13.00E-16serine/threonine protein kinase Pkn1 [Myxococcus xanthus DK 1622]
Swissprottr|P42158|KC1D_ARATH0Casein kinase I isoform delta-like
trEMBLtr|M5XYH5|M5XYH5_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ24310.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005579246498558+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:3.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K08960CSNK1E EC:2.7.11.1 Wnt signaling pathway map04310
Hedgehog signaling pathwaymap04340
Hedgehog signaling pathway - flymap04341
Hippo signaling pathwaymap04390
Hippo signaling pathway -flymap04391
Hippo signaling pathway - multiple speciesmap04392
FoxO signaling pathwaymap04068
Circadian rhythmmap04710
Circadian rhythm - flymap04711


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000557s00018791.2PF00069.20Pkinase92391.80E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control28.625
SRR1783600control28.954
SRR1783602moderate drought stress25.113
SRR1811619moderate drought stress25.000

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain35.792
DRR006520Root Summer glycyrrhizin high producing strain35.964
DRR006521Root Winter glycyrrhizin high producing strain33.162
DRR006522Root Winter glycyrrhizin high producing strain32.247
DRR006523Root Summer glycyrrhizin low producing strain28.059
DRR006524Root Summer glycyrrhizin low producing strain28.261
DRR006525Leaf Summer glycyrrhizin high producing strain20.759
DRR006526Leaf Summer glycyrrhizin high producing strain20.597

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)45.988
SRR2868004Drought Stress(Tissue:root)51.369
SRR2967015Control (Tissue:root)53.018

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave36.400
SRR9715740Leave36.424
SRR9715741Leave42.981
SRR9715739Root9.914
SRR9715742Root34.086
SRR9715743Root27.676

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h18.373
SRR8749028MeJA induced 9h16.586
SRR8749029MeJA induced 9h12.196
SRR8749030Uninduced16.479
SRR8749031Uninduced12.114
SRR8749032Uninduced13.134

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root53.055
SRR8400027Control-Root51.240

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved