Gene detail information of Glyur000559s00020524.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G22130.12.00E-160mannosyltransferase family protein
NRXP_004511056.10PREDICTED: GPI mannosyltransferase 1-like isoform X1 [Cicer arietinum]
Swissprottr|Q500W7|PIGM_ARATH0GPI mannosyltransferase 1
trEMBLtr|I1KTS4|I1KTS4_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G16980.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005598933292863-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT50


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05284PIGM EC:2.4.1.- Glycosylphosphatidylinositol(GPI)-anchor biosynthesis map00563


Gene Ontology

biological_process

GO:0006506  GPI anchor biosynthetic process


cellular_component

GO:0016021  integral component of membrane


molecular_function

GO:0016758  transferase activity, transferring hexosyl groups

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000559s00020524.1PF05007.8Mannosyl_trans1284095.90E-75


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.474
SRR1783600control12.634
SRR1783602moderate drought stress15.643
SRR1811619moderate drought stress15.371

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.416
DRR006520Root Summer glycyrrhizin high producing strain13.045
DRR006521Root Winter glycyrrhizin high producing strain15.721
DRR006522Root Winter glycyrrhizin high producing strain14.888
DRR006523Root Summer glycyrrhizin low producing strain6.906
DRR006524Root Summer glycyrrhizin low producing strain6.998
DRR006525Leaf Summer glycyrrhizin high producing strain7.748
DRR006526Leaf Summer glycyrrhizin high producing strain7.149

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)29.264
SRR2868004Drought Stress(Tissue:root)27.865
SRR2967015Control (Tissue:root)26.813

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.970
SRR9715740Leave15.720
SRR9715741Leave15.043
SRR9715739Root7.766
SRR9715742Root10.908
SRR9715743Root11.119

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.497
SRR8749028MeJA induced 9h8.690
SRR8749029MeJA induced 9h6.898
SRR8749030Uninduced7.705
SRR8749031Uninduced2.159
SRR8749032Uninduced3.160

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root24.369
SRR8400027Control-Root22.557

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved