Gene detail information of Glyur000559s00020529.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G38730.12.00E-49Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
NRXP_004307084.17.85E-63PREDICTED: peptidyl-prolyl cis-trans isomerase H-like [Fragaria vesca subsp. vesca]
COGNP_868477.11.00E-29peptidylprolyl isomerase [Rhodopirellula baltica SH 1]
Swissprottr|Q9ZVJ4|CYP22_ARATH6.00E-62Peptidyl-prolyl cis-trans isomerase CYP22
trEMBLtr|A0A067L7Q9|A0A067L7Q9_JATCU4.00E-63Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00559132782134004+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09567PPIH, CYPH EC:5.2.1.8 Spliceosome map03040


Gene Ontology

biological_process

GO:0000413  protein peptidyl-prolyl isomerization

GO:0006457  protein folding


molecular_function

GO:0003755  peptidyl-prolyl cis-trans isomerase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000559s00020529.1PF00160.16Pro_isomerase11958.40E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control24.768
SRR1783600control24.462
SRR1783602moderate drought stress20.548
SRR1811619moderate drought stress20.349

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.541
DRR006520Root Summer glycyrrhizin high producing strain16.915
DRR006521Root Winter glycyrrhizin high producing strain7.532
DRR006522Root Winter glycyrrhizin high producing strain8.392
DRR006523Root Summer glycyrrhizin low producing strain16.013
DRR006524Root Summer glycyrrhizin low producing strain16.344
DRR006525Leaf Summer glycyrrhizin high producing strain12.478
DRR006526Leaf Summer glycyrrhizin high producing strain10.876

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)9.588
SRR2868004Drought Stress(Tissue:root)16.662
SRR2967015Control (Tissue:root)10.561

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.764
SRR9715740Leave11.011
SRR9715741Leave10.493
SRR9715739Root4.454
SRR9715742Root2.840
SRR9715743Root3.692

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.598
SRR8749028MeJA induced 9h0.358
SRR8749029MeJA induced 9h4.956
SRR8749030Uninduced1.136
SRR8749031Uninduced0.000
SRR8749032Uninduced1.029

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.302
SRR8400027Control-Root11.155

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved