Gene detail information of Glyur000560s00027501.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G65140.16.00E-127Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
NRXP_003527912.10PREDICTED: probable trehalose-phosphate phosphatase J-like isoform X1 [Glycine max]
COGYP_003269585.11.00E-56trehalose-phosphatase [Haliangium ochraceum DSM 14365]
Swissprottr|Q5HZ05|TPPJ_ARATH1.00E-156Probable trehalose-phosphate phosphatase J
trEMBLtr|I1KA05|I1KA05_SOYBN0Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005601581218358-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01087otsB EC:3.1.3.12 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005992  trehalose biosynthetic process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000560s00027501.1PF02358.11Trehalose_PPase1283662.20E-73


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.264
SRR1783600control16.294
SRR1783602moderate drought stress15.627
SRR1811619moderate drought stress15.596

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.757
DRR006520Root Summer glycyrrhizin high producing strain7.832
DRR006521Root Winter glycyrrhizin high producing strain0.160
DRR006522Root Winter glycyrrhizin high producing strain0.156
DRR006523Root Summer glycyrrhizin low producing strain15.691
DRR006524Root Summer glycyrrhizin low producing strain16.826
DRR006525Leaf Summer glycyrrhizin high producing strain2.062
DRR006526Leaf Summer glycyrrhizin high producing strain2.071

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)21.809
SRR2868004Drought Stress(Tissue:root)24.758
SRR2967015Control (Tissue:root)21.459

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.028
SRR9715740Leave1.892
SRR9715741Leave2.114
SRR9715739Root3.046
SRR9715742Root16.287
SRR9715743Root13.595

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.084
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.044
SRR8749030Uninduced0.364
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.037
SRR8400027Control-Root5.954

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved