Gene detail information of Glyur000561s00023432.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G13040.12.00E-37Integrase-type DNA-binding superfamily protein
NRKEH18135.14.82E-115ethylene response factor [Medicago truncatula]
Swissprottr|Q56XP9|ERFL1_ARATH1.00E-47Ethylene-responsive transcription factor-like protein At4g13040
trEMBLtr|A0A072TX66|A0A072TX66_MEDTR2.00E-115Ethylene response factor {ECO:0000313|EMBL:KEH18135.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005612453428781+


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000561s00023432.2PF00847.15AP2901316.30E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.468
SRR1783600control12.694
SRR1783602moderate drought stress10.048
SRR1811619moderate drought stress9.666

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.676
DRR006520Root Summer glycyrrhizin high producing strain7.484
DRR006521Root Winter glycyrrhizin high producing strain32.466
DRR006522Root Winter glycyrrhizin high producing strain30.495
DRR006523Root Summer glycyrrhizin low producing strain5.667
DRR006524Root Summer glycyrrhizin low producing strain4.202
DRR006525Leaf Summer glycyrrhizin high producing strain9.825
DRR006526Leaf Summer glycyrrhizin high producing strain9.023

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.769
SRR2868004Drought Stress(Tissue:root)11.253
SRR2967015Control (Tissue:root)10.524

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.388
SRR9715740Leave16.073
SRR9715741Leave17.923
SRR9715739Root1.801
SRR9715742Root9.050
SRR9715743Root6.644

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.502
SRR8749028MeJA induced 9h28.117
SRR8749029MeJA induced 9h41.092
SRR8749030Uninduced36.138
SRR8749031Uninduced19.688
SRR8749032Uninduced20.926

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.695
SRR8400027Control-Root14.802

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved