Gene detail information of Glyur000563s00023598.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G35940.3 | 7.00E-85 | BEL1-like homeodomain 1 |
| NR | XP_007132496.1 | 0 | hypothetical protein PHAVU_011G099100g [Phaseolus vulgaris] |
| Swissprot | tr|Q9SJ56|BLH1_ARATH | 2.00E-114 | BEL1-like homeodomain protein 1 |
| trEMBL | tr|V7AGT9|V7AGT9_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW04490.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00563 | 134236 | 142671 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000563s00023598.1 | PF07526.6 | POX | 224 | 370 | 5.10E-51 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 53.481 |
| SRR1783600 | control | 53.439 |
| SRR1783602 | moderate drought stress | 65.782 |
| SRR1811619 | moderate drought stress | 65.754 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 58.832 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 58.265 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.321 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 24.779 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 46.229 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 46.856 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 29.272 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 29.401 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.080 |
| SRR2868004 | Drought Stress(Tissue:root) | 10.129 |
| SRR2967015 | Control (Tissue:root) | 10.007 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 27.068 |
| SRR9715740 | Leave | 38.304 |
| SRR9715741 | Leave | 35.677 |
| SRR9715739 | Root | 7.734 |
| SRR9715742 | Root | 40.905 |
| SRR9715743 | Root | 34.503 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.144 |
| SRR8749029 | MeJA induced 9h | 0.017 |
| SRR8749030 | Uninduced | 0.139 |
| SRR8749031 | Uninduced | 0.021 |
| SRR8749032 | Uninduced | 0.016 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 38.054 |
| SRR8400027 | Control-Root | 42.398 |