Gene detail information of Glyur000565s00025194.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G57330.12.00E-141Galactose mutarotase-like superfamily protein
NRXP_003533724.10PREDICTED: putative glucose-6-phosphate 1-epimerase-like isoformX1 [Glycine max]
COGYP_002355684.13.00E-60aldose 1-epimerase [Thauera sp. MZ1T]
Swissprottr|Q40784|AAPC_CENCI3.00E-177Putative glucose-6-phosphate 1-epimerase
trEMBLtr|K7LC03|K7LC03_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G06380.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005656620375131+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01792E5.1.3.15 EC:5.1.3.15 Glycolysis / Gluconeogenesis map00010


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0016853  isomerase activity

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000565s00025194.1PF01263.15Aldose_epim332976.40E-62


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control28.548
SRR1783600control28.257
SRR1783602moderate drought stress23.266
SRR1811619moderate drought stress22.855

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain33.571
DRR006520Root Summer glycyrrhizin high producing strain33.381
DRR006521Root Winter glycyrrhizin high producing strain23.556
DRR006522Root Winter glycyrrhizin high producing strain21.816
DRR006523Root Summer glycyrrhizin low producing strain32.502
DRR006524Root Summer glycyrrhizin low producing strain31.921
DRR006525Leaf Summer glycyrrhizin high producing strain19.128
DRR006526Leaf Summer glycyrrhizin high producing strain18.800

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)57.774
SRR2868004Drought Stress(Tissue:root)46.097
SRR2967015Control (Tissue:root)46.729

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave27.240
SRR9715740Leave35.331
SRR9715741Leave27.702
SRR9715739Root25.470
SRR9715742Root30.987
SRR9715743Root30.893

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h94.097
SRR8749028MeJA induced 9h66.264
SRR8749029MeJA induced 9h62.717
SRR8749030Uninduced19.910
SRR8749031Uninduced14.421
SRR8749032Uninduced23.739

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root42.580
SRR8400027Control-Root40.221

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved