Gene detail information of Glyur000565s00025196.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G30170.1 | 7.00E-103 | Peroxidase family protein |
| NR | XP_003533723.1 | 1.18E-161 | PREDICTED: peroxidase 16-like [Glycine max] |
| Swissprot | tr|Q96522|PER45_ARATH | 1.00E-127 | Peroxidase 45 (Precursor) |
| trEMBL | tr|I1L1B0|I1L1B0_SOYBN | 4.00E-162 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G06350.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00565 | 78536 | 81182 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00430 | E1.11.1.7 | EC:1.11.1.7 | Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000565s00025196.1 | PF00141.18 | peroxidase | 45 | 252 | 1.00E-39 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.041 |
| SRR1783600 | control | 0.084 |
| SRR1783602 | moderate drought stress | 0.024 |
| SRR1811619 | moderate drought stress | 0.043 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.105 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.957 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.546 |
| SRR2967015 | Control (Tissue:root) | 5.393 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.028 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.815 |
| SRR8749028 | MeJA induced 9h | 3.071 |
| SRR8749029 | MeJA induced 9h | 3.599 |
| SRR8749030 | Uninduced | 1.999 |
| SRR8749031 | Uninduced | 3.325 |
| SRR8749032 | Uninduced | 0.705 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 6.451 |
| SRR8400027 | Control-Root | 7.005 |