Gene detail information of Glyur000567s00021958.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G48300.10ADP glucose pyrophosphorylase 1
NRXP_003519654.10PREDICTED: glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic-like isoform 1 [Glycine max]
COGYP_007066226.10glucose-1-phosphate adenylyltransferase [Calothrix sp. PCC 7507]
Swissprottr|P52417|GLGS2_VICFA0Glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic (Precursor)
trEMBLtr|I1JJP2|I1JJP2_SOYBN0Glucose-1-phosphate adenylyltransferase {ECO:0000256|RuleBase:RU003565}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005677208175917-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00975glgC EC:2.7.7.27 Starch and sucrose metabolism map00500
Amino sugar and nucleotide sugar metabolismmap00520
Biofilm formation - Escherichia colimap02026


Gene Ontology

biological_process

GO:0005978  glycogen biosynthetic process

GO:0009058  biosynthetic process


molecular_function

GO:0008878  glucose-1-phosphate adenylyltransferase activity

GO:0016779  nucleotidyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000567s00021958.1PF00483.18NTP_transferase893623.20E-73


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control602.420
SRR1783600control603.883
SRR1783602moderate drought stress314.791
SRR1811619moderate drought stress311.957

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain188.081
DRR006520Root Summer glycyrrhizin high producing strain186.477
DRR006521Root Winter glycyrrhizin high producing strain104.669
DRR006522Root Winter glycyrrhizin high producing strain102.191
DRR006523Root Summer glycyrrhizin low producing strain160.359
DRR006524Root Summer glycyrrhizin low producing strain160.943
DRR006525Leaf Summer glycyrrhizin high producing strain215.729
DRR006526Leaf Summer glycyrrhizin high producing strain213.651

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)71.652
SRR2868004Drought Stress(Tissue:root)41.118
SRR2967015Control (Tissue:root)22.693

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave103.117
SRR9715740Leave128.526
SRR9715741Leave108.503
SRR9715739Root186.526
SRR9715742Root292.359
SRR9715743Root274.188

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.367
SRR8749028MeJA induced 9h11.236
SRR8749029MeJA induced 9h11.603
SRR8749030Uninduced1.807
SRR8749031Uninduced0.514
SRR8749032Uninduced0.677

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root463.651
SRR8400027Control-Root533.150

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved