Gene detail information of Glyur000567s00021962.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G07380.1 | 0 | Neutral/alkaline non-lysosomal ceramidase |
| NR | XP_004491555.1 | 0 | PREDICTED: neutral ceramidase-like [Cicer arietinum] |
| Swissprot | tr|Q304B9|NCASE_ARATH | 0 | Neutral ceramidase (Precursor) |
| trEMBL | tr|I1M6B9|I1M6B9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G01330.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00567 | 91373 | 96626 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K12349 | ASAH2 | EC:3.5.1.23 | Sphingolipid metabolism | map00600 |
| Sphingolipid signaling pathway | map04071 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000567s00021962.1 | PF04734.8 | Ceramidase_alk | 31 | 768 | 2.90E-305 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 43.735 |
| SRR1783600 | control | 43.922 |
| SRR1783602 | moderate drought stress | 47.674 |
| SRR1811619 | moderate drought stress | 47.480 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 41.967 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 41.928 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 36.564 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 35.546 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 54.697 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 55.449 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.338 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 53.176 |
| SRR2868004 | Drought Stress(Tissue:root) | 60.319 |
| SRR2967015 | Control (Tissue:root) | 52.060 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 39.660 |
| SRR9715740 | Leave | 38.540 |
| SRR9715741 | Leave | 36.208 |
| SRR9715739 | Root | 42.542 |
| SRR9715742 | Root | 68.105 |
| SRR9715743 | Root | 67.971 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 33.334 |
| SRR8749028 | MeJA induced 9h | 37.857 |
| SRR8749029 | MeJA induced 9h | 25.604 |
| SRR8749030 | Uninduced | 17.867 |
| SRR8749031 | Uninduced | 10.246 |
| SRR8749032 | Uninduced | 14.318 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 51.610 |
| SRR8400027 | Control-Root | 45.187 |