Gene detail information of Glyur000568s00030990.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G65140.11.00E-140Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
NRXP_007159639.10hypothetical protein PHAVU_002G254600g [Phaseolus vulgaris]
COGYP_003269585.16.00E-63trehalose-phosphatase [Haliangium ochraceum DSM 14365]
Swissprottr|Q5HZ05|TPPJ_ARATH0Probable trehalose-phosphate phosphatase J
trEMBLtr|V7CQK2|V7CQK2_PHAVU0Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005685813661323-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01087otsB EC:3.1.3.12 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005992  trehalose biosynthetic process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000568s00030990.1PF02358.11Trehalose_PPase1063544.20E-71


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.001
SRR1783600control7.085
SRR1783602moderate drought stress7.118
SRR1811619moderate drought stress7.073

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain57.161
DRR006520Root Summer glycyrrhizin high producing strain56.362
DRR006521Root Winter glycyrrhizin high producing strain43.656
DRR006522Root Winter glycyrrhizin high producing strain42.760
DRR006523Root Summer glycyrrhizin low producing strain195.184
DRR006524Root Summer glycyrrhizin low producing strain193.929
DRR006525Leaf Summer glycyrrhizin high producing strain16.048
DRR006526Leaf Summer glycyrrhizin high producing strain15.758

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)21.009
SRR2868004Drought Stress(Tissue:root)23.537
SRR2967015Control (Tissue:root)25.239

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.566
SRR9715740Leave8.116
SRR9715741Leave17.512
SRR9715739Root2.938
SRR9715742Root20.246
SRR9715743Root16.031

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.795
SRR8749028MeJA induced 9h15.324
SRR8749029MeJA induced 9h45.270
SRR8749030Uninduced16.419
SRR8749031Uninduced3.862
SRR8749032Uninduced7.528

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.035
SRR8400027Control-Root23.181

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved