Gene detail information of Glyur000569s00020978.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G04930.1 | 1.00E-39 | DNA-binding storekeeper protein-related transcriptional regulator |
| NR | XP_004494676.1 | 8.68E-159 | PREDICTED: probable protein phosphatase DDB_G0282105-like [Cicer arietinum] |
| Swissprot | tr|Q9SB42|MDA1_ARATH | 8.00E-16 | Mediator-associated protein 1 |
| trEMBL | tr|G7L0U1|G7L0U1_MEDTR | 5.00E-148 | DUF573 family protein {ECO:0000313|EMBL:AES82612.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00569 | 53221 | 55701 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GeBP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000569s00020978.1 | PF04504.9 | DUF573 | 107 | 194 | 1.20E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 63.177 |
| SRR1783600 | control | 63.579 |
| SRR1783602 | moderate drought stress | 65.533 |
| SRR1811619 | moderate drought stress | 65.253 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 55.618 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 56.315 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 119.441 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 117.378 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 105.387 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 105.577 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 30.877 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 30.174 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 50.547 |
| SRR2868004 | Drought Stress(Tissue:root) | 59.471 |
| SRR2967015 | Control (Tissue:root) | 61.694 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 51.654 |
| SRR9715740 | Leave | 54.262 |
| SRR9715741 | Leave | 75.084 |
| SRR9715739 | Root | 129.887 |
| SRR9715742 | Root | 92.566 |
| SRR9715743 | Root | 95.716 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 77.886 |
| SRR8749028 | MeJA induced 9h | 125.788 |
| SRR8749029 | MeJA induced 9h | 133.317 |
| SRR8749030 | Uninduced | 142.193 |
| SRR8749031 | Uninduced | 140.310 |
| SRR8749032 | Uninduced | 125.020 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 66.217 |
| SRR8400027 | Control-Root | 63.913 |