Gene detail information of Glyur000570s00022975.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G08850.10Leucine-rich repeat receptor-like protein kinase family protein
NRXP_004492922.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Cicer arietinum]
COGYP_004775215.11.00E-62RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q8VZG8|Y4885_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At4g08850 (Precursor)
trEMBLtr|I1N463|I1N463_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G48590.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005707593793035+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000570s00022975.1PF08263.7LRRNT_2641011.00E-06
Glyur000570s00022975.1PF13855.1LRR_81782378.20E-10
Glyur000570s00022975.1PF00560.28LRR_12752970.42
Glyur000570s00022975.1PF00560.28LRR_13483700.23
Glyur000570s00022975.1PF00560.28LRR_13723940.28
Glyur000570s00022975.1PF00560.28LRR_16126320.67
Glyur000570s00022975.1PF13855.1LRR_86376986.70E-07
Glyur000570s00022975.1PF00069.20Pkinase81510817.80E-43
Glyur000570s00022975.1PF08263.7LRRNT_2130013374.10E-07
Glyur000570s00022975.1PF00560.28LRR_1141414360.16
Glyur000570s00022975.1PF00560.28LRR_1170917290.67
Glyur000570s00022975.1PF13855.1LRR_8173417951.60E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.690
SRR1783600control2.662
SRR1783602moderate drought stress2.433
SRR1811619moderate drought stress2.548

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.057
DRR006520Root Summer glycyrrhizin high producing strain4.978
DRR006521Root Winter glycyrrhizin high producing strain0.082
DRR006522Root Winter glycyrrhizin high producing strain0.056
DRR006523Root Summer glycyrrhizin low producing strain2.332
DRR006524Root Summer glycyrrhizin low producing strain2.195
DRR006525Leaf Summer glycyrrhizin high producing strain2.329
DRR006526Leaf Summer glycyrrhizin high producing strain2.310

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.224
SRR2868004Drought Stress(Tissue:root)6.415
SRR2967015Control (Tissue:root)4.592

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.530
SRR9715740Leave0.511
SRR9715741Leave0.542
SRR9715739Root0.729
SRR9715742Root2.614
SRR9715743Root1.758

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.177
SRR8749028MeJA induced 9h0.107
SRR8749029MeJA induced 9h0.058
SRR8749030Uninduced0.149
SRR8749031Uninduced0.074
SRR8749032Uninduced0.037

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.653
SRR8400027Control-Root3.161

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved