Gene detail information of Glyur000573s00021779.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39420.1 | 1.00E-135 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_006606554.1 | 0 | PREDICTED: caffeoylshikimate esterase-like isoform X2 [Glycine max] |
| COG | YP_003571913.1 | 1.00E-41 | lysophospholipase [Salinibacter ruber M8] |
| Swissprot | tr|Q9C942|CSE_ARATH | 1.00E-53 | Caffeoylshikimate esterase |
| trEMBL | tr|I1NJ62|I1NJ62_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G38470.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00573 | 66772 | 72265 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01054 | MGLL | EC:3.1.1.23 | Glycerolipid metabolism | map00561 |
| Regulation of lipolysis in adipocyte | map04923 | |||
| Retrograde endocannabinoid signaling | map04723 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000573s00021779.1 | PF12695.2 | Abhydrolase_5 | 38 | 268 | 9.60E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 31.924 |
| SRR1783600 | control | 31.637 |
| SRR1783602 | moderate drought stress | 71.842 |
| SRR1811619 | moderate drought stress | 71.663 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 70.558 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 71.996 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.008 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.374 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 112.721 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 113.019 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 109.736 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 108.673 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 107.088 |
| SRR2868004 | Drought Stress(Tissue:root) | 149.806 |
| SRR2967015 | Control (Tissue:root) | 170.749 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 285.505 |
| SRR9715740 | Leave | 275.307 |
| SRR9715741 | Leave | 367.056 |
| SRR9715739 | Root | 50.123 |
| SRR9715742 | Root | 152.251 |
| SRR9715743 | Root | 135.437 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 82.917 |
| SRR8749028 | MeJA induced 9h | 212.094 |
| SRR8749029 | MeJA induced 9h | 145.131 |
| SRR8749030 | Uninduced | 58.182 |
| SRR8749031 | Uninduced | 139.360 |
| SRR8749032 | Uninduced | 102.329 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 88.955 |
| SRR8400027 | Control-Root | 76.902 |