Gene detail information of Glyur000574s00030973.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G65140.18.00E-129Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
NRXP_006601938.10PREDICTED: probable trehalose-phosphate phosphatase J-like [Glycine max]
COGYP_003951497.12.00E-50beta-phosphoglucomutase hydrolase [Stigmatella aurantiaca DW4/3-1]
Swissprottr|Q5HZ05|TPPJ_ARATH8.00E-161Probable trehalose-phosphate phosphatase J
trEMBLtr|I1MYT2|I1MYT2_SOYBN0Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005743073633360-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01087otsB EC:3.1.3.12 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005992  trehalose biosynthetic process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000574s00030973.2PF02358.11Trehalose_PPase1163304.20E-69


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.506
SRR1783600control3.314
SRR1783602moderate drought stress4.759
SRR1811619moderate drought stress4.828

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.498
DRR006520Root Summer glycyrrhizin high producing strain7.642
DRR006521Root Winter glycyrrhizin high producing strain1.056
DRR006522Root Winter glycyrrhizin high producing strain0.995
DRR006523Root Summer glycyrrhizin low producing strain5.081
DRR006524Root Summer glycyrrhizin low producing strain5.045
DRR006525Leaf Summer glycyrrhizin high producing strain1.596
DRR006526Leaf Summer glycyrrhizin high producing strain1.535

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.627
SRR2868004Drought Stress(Tissue:root)7.710
SRR2967015Control (Tissue:root)15.431

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.716
SRR9715740Leave5.043
SRR9715741Leave10.292
SRR9715739Root0.307
SRR9715742Root10.348
SRR9715743Root7.615

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.625
SRR8749028MeJA induced 9h0.053
SRR8749029MeJA induced 9h0.098
SRR8749030Uninduced0.041
SRR8749031Uninduced0.000
SRR8749032Uninduced0.062

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.908
SRR8400027Control-Root9.781

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved