Gene detail information of Glyur000574s00030977.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G39780.13.00E-41Integrase-type DNA-binding superfamily protein
NRXP_003552083.16.62E-91PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Glycine max]
Swissprottr|O65665|ERF60_ARATH2.00E-68Ethylene-responsive transcription factor ERF060
trEMBLtr|I1MYT3|I1MYT3_SOYBN2.00E-91Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G02170.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005748209182984-


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000574s00030977.1PF00847.15AP21131638.60E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.080
SRR1783600control1.099
SRR1783602moderate drought stress1.722
SRR1811619moderate drought stress1.798

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.362
DRR006520Root Summer glycyrrhizin high producing strain20.751
DRR006521Root Winter glycyrrhizin high producing strain4.407
DRR006522Root Winter glycyrrhizin high producing strain3.773
DRR006523Root Summer glycyrrhizin low producing strain27.471
DRR006524Root Summer glycyrrhizin low producing strain26.644
DRR006525Leaf Summer glycyrrhizin high producing strain5.283
DRR006526Leaf Summer glycyrrhizin high producing strain5.138

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.915
SRR2868004Drought Stress(Tissue:root)26.099
SRR2967015Control (Tissue:root)38.108

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.296
SRR9715740Leave4.325
SRR9715741Leave19.954
SRR9715739Root1.820
SRR9715742Root10.961
SRR9715743Root9.217

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h60.150
SRR8749028MeJA induced 9h157.094
SRR8749029MeJA induced 9h28.581
SRR8749030Uninduced21.080
SRR8749031Uninduced103.578
SRR8749032Uninduced29.511

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.917
SRR8400027Control-Root1.655

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved