Gene detail information of Glyur000577s00027220.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G59220.11.00E-56highly ABA-induced PP2C gene 1
NRXP_004511520.11.97E-168PREDICTED: probable protein phosphatase 2C 8-like [Cicer arietinum]
COGYP_003709340.12.00E-19serine/threonine PP2C protein phosphatase [Waddlia chondrophila WSU 86-1044]
Swissprottr|Q5SN75|P2C08_ORYSJ5.00E-111Probable protein phosphatase 2C 8
trEMBLtr|G7KAL2|G7KAL2_MEDTR4.00E-163Phosphatase 2C family protein {ECO:0000313|EMBL:AES93958.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005774261993+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14497PP2C EC:3.1.3.16 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075
Insulin resistancemap04931


Gene Ontology

biological_process

GO:0006470  protein dephosphorylation


molecular_function

GO:0003824  catalytic activity

GO:0004722  protein serine/threonine phosphatase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000577s00027220.1PF00481.16PP2C533238.70E-61


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.018
SRR1783600control0.018
SRR1783602moderate drought stress0.019
SRR1811619moderate drought stress0.008

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.377
DRR006520Root Summer glycyrrhizin high producing strain5.824
DRR006521Root Winter glycyrrhizin high producing strain17.319
DRR006522Root Winter glycyrrhizin high producing strain17.179
DRR006523Root Summer glycyrrhizin low producing strain1.360
DRR006524Root Summer glycyrrhizin low producing strain1.231
DRR006525Leaf Summer glycyrrhizin high producing strain0.511
DRR006526Leaf Summer glycyrrhizin high producing strain0.577

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.223
SRR2868004Drought Stress(Tissue:root)0.535
SRR2967015Control (Tissue:root)0.549

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.919
SRR9715740Leave0.450
SRR9715741Leave0.398
SRR9715739Root0.074
SRR9715742Root0.273
SRR9715743Root0.173

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.589
SRR8749028MeJA induced 9h6.242
SRR8749029MeJA induced 9h1.564
SRR8749030Uninduced4.405
SRR8749031Uninduced1.156
SRR8749032Uninduced1.185

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.226
SRR8400027Control-Root0.111

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved