Gene detail information of Glyur000578s00021005.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G29000.2 | 3.00E-68 | Homeodomain-like superfamily protein |
| NR | XP_003590977.1 | 0 | Two-component response regulator ARR2 [Medicago truncatula] |
| Swissprot | tr|Q8GUN5|PHL1_ARATH | 4.00E-80 | Protein PHR1-LIKE 1 |
| trEMBL | tr|G7I6T3|G7I6T3_MEDTR | 0 | Myb-like transcription factor family protein {ECO:0000313|EMBL:AES61228.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00578 | 68921 | 73236 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000578s00021005.1 | PF00249.26 | Myb_DNA-binding | 194 | 245 | 6.00E-15 |
| Glyur000578s00021005.1 | PF14379.1 | Myb_CC_LHEQLE | 280 | 324 | 6.00E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.227 |
| SRR1783600 | control | 13.056 |
| SRR1783602 | moderate drought stress | 19.546 |
| SRR1811619 | moderate drought stress | 19.574 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.551 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.337 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.540 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.676 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.281 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.433 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.897 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.694 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 23.234 |
| SRR2868004 | Drought Stress(Tissue:root) | 27.452 |
| SRR2967015 | Control (Tissue:root) | 27.818 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 22.445 |
| SRR9715740 | Leave | 32.654 |
| SRR9715741 | Leave | 29.395 |
| SRR9715739 | Root | 3.811 |
| SRR9715742 | Root | 7.593 |
| SRR9715743 | Root | 8.317 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.165 |
| SRR8749028 | MeJA induced 9h | 11.042 |
| SRR8749029 | MeJA induced 9h | 10.382 |
| SRR8749030 | Uninduced | 16.583 |
| SRR8749031 | Uninduced | 8.052 |
| SRR8749032 | Uninduced | 9.548 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 14.253 |
| SRR8400027 | Control-Root | 12.695 |