Gene detail

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Gene detail information of Glyur000580s00024211.2

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G36870.2	3.00E-113	BEL1-like homeodomain 2
NR	XP_007156875.1	0	hypothetical protein PHAVU_002G024800g [Phaseolus vulgaris]
Swissprot	tr\|Q9SW80\|BLH2_ARATH	2.00E-147	BEL1-like homeodomain protein 2
trEMBL	tr\|V7CFF6\|V7CFF6_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW28869.1}

Sequence

Transcript Sequence

>Glyur000580s00024211.2
ATGGGAATAGCAACAACACTTGTCTCCCATCATCAGCATCATTTGAAGACACACCATACCTTGGATTTGGATTATTGTTCCAATAATAATTCTATGTCCCACGATTATCATCAGGAAGCTGGAATCTTNGGGTTCTCGAATAATGGGTTCGAGAGATCAGAACAACAGCAACAGATCCGAAGGGACAAAGTAGTGAGGTTGCAACAAGGGTTCGATTCAGCAGCAGCAGCACCATTGGTAGGGATAGGAGAAGGAGAAGAAGAAGAAGAACCGGGAGGAGGAGGAGGGATTCCGGTGGTGTATGAAACTGGAGGGATGTTGTCGGAGATGTTCAATTTCGCTCCCTCCACAGCAGAATTGCTGGAACACCAGCCCGTGACGGCGACGTTTCGTTCCACCACCACATCGAGGCCACAGGACTGGTANGGTGGTAACAGACAAGGGATGATGATGATAACCGGGTTGGGACCCTTGGGAGATTCAAAGAATCAAAACAACACTAACAACAACAACAACAACCATCATCATCATAATCAGATTTCAGGCATAAATGCAGCAGAATCAGCGGCTGCCATGCAGCTTTTTCTAATGAACCCTTCTTCTCATCATCAAACAAGATCACCTTCCCCTCCTCCTCCTCCTCCTCCTCCTACTTCTTCTTCCACTCTCCACATGTTGCTCCCAAACCCTTCCTCCAATTCCCTGCAGCAGCAGGGTTTCCCAGGAGGAGGGGGTTTTGGACAATTCACATGGGGTAGTACTCAAGAAGGAGCCACCACCACCACTGGCCCTGTTGTGGAAGGACAGGGTCTTTCCTTATCACTCTCCTCTCTGCAGCACTTAGAAGCCGCCAAAGCCGAGGAATTGAGAATGGGGGATACCAGTTTTCTTTATTACAACAATAATCAAACAGCTGGTNGTGGTGGAGGACCTTCTTTGTATCCGTACAAGAATCATCATAACCATCATCATCACTTGCAAGGGGCCGTTGGACACCACAACAACCACCAGGGATTTGGGTCACCCTCCTCTTCCTTAGGTGTAGTTAATGTTCTGCGGAATTCAAAGTATGTGAAGGCAGCTCAAGAATTGCTGCAAGAGTTTTGCAGTGTTGGGAGGGGGAACCAGTTTACAACAAAGAGCAAGTTCACTAGGCAGAATTCGAACCCTAATTCAAATCCCGGTGCCTCTTCGTCTTCATCAAAAGACCCTCCTCCTCCTGTTCTTCCTTTGTCTGCGGCTGATAGGATTGAGCATCAGAGAAGGAAGGTCAAACTTCTATCCATGCTTGACGAGGCATGTAAATCTCTCTCTCACCCTCTCTCGTCATTCAAGAGTGAGTACCAAGTAAAGGTGGAGCGGAGATACAATCACTACTGCGAGCAAATGCAAATGGTGGTGAACTCATTTGACCTGATGATGGGTTTTGGAGCGGCGGTTCCATACACGTCACTGGCGCAGAAAGCGATGTCTCGACATTTCCGGTGTCTAAAGGATGCGATAACAGCGCAGCTGAAGCACAGTTGTGAGGTACTGGGAGAGAAAGAAGGGGCGGGTACTTCGGGTTTGACCAAGGGAGAGACACCTAGGCTTAAGATGCTAGAACAAAGTTTAAGACAGCAGAGAGCATTTCACCAGATGGGGATGATGGAACAGGAAGCTTGGAGACCCCAGAGAGGCCTCCCCGAACGTTCTGTCAACATTTTGAGAGCCTGGCTTTTCGAGCATTTTCTACACCCGTACCCAAGCGACGCTGATAAGCATCTCTTGGCACGACAGACTGGGCTATCGCGAAATCAGGTATCAAACTGGTTCATAAATGCCAGGGTTCGGTTGTGGAAACCCATGGTGGAAGAGATGTACCAACAAGAACATAAAGAAGCAGAGTGTGCAAGAGCAGAAGAAGAGAGAGACAGGAACCAAAGCAGCAACAACAGCAGCAATATTAGTGGCCACCACATAGCACAAACTCCAACCACACCAGCAGCAGCAGCAGCAGCTACGACATCAACAGCACCACCACCACCAACAATAACGACGACAACAACAACAACAGGCAAAAGATCCGATATCATCAATAATGCTGCTCATGAAAGCGACCCTTCACTCGTTGCAATCAATAGATCACAAGGCTTCTCGGAAAACCAAGCGAAGCAATCCACCACCGTTATAGCCACCAATGCGGCCATCAACGCCACCGCCTCTGAGGTGGCGCCACCCGTGTCTCAGTGCTTCGACGTCTCAATGGCCACAGATGACACGTGTCGCTATGTCACGGCAGAGTACGAGACAGCCTCTGCGAGTGCTCATGACCACATTGGATCCACTCTCATTAGATTTGGGACCACCGCCGGTGACGTGTCACTCACCCTAGGGCTACGCCACGCCGGGAACATGCCCGAAAAAACTTCTTTCTCTGTTAGAGACTTTGGAGGCATTTAATTTAATTAATTNAACCTTCCCATATAGTACTTTACATAATCATAAATAATAATAATATATATAGGAAGATTGATGGTTTATTATTATGTTATTATAAATATCATCAAAAGAAAAACTTTTTTTTTACCCCTTTAATTATGTTTTCCTCCGTCTTTTGTTTGCATTGTGGAAGGACAGGAGAGAAGGTAATACATGAGAAACTAGTCCTGATTAAGTTAGCTAATATATA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00580	108058	116095	+

Gene family

Gene family	subfamily
Transcription Factors Family	HB
EAR motif-containing Proteins	HB

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function GO:0003677 DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000580s00024211.2	PF07526.6	POX	351	502	1.10E-48
Glyur000580s00024211.2	PF05920.6	Homeobox_KN	572	611	1.00E-16

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	20.256
SRR1783600	control	19.957
SRR1783602	moderate drought stress	43.785
SRR1811619	moderate drought stress	43.586

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	16.288
DRR006520	Root Summer glycyrrhizin high producing strain	16.082
DRR006521	Root Winter glycyrrhizin high producing strain	4.076
DRR006522	Root Winter glycyrrhizin high producing strain	3.811
DRR006523	Root Summer glycyrrhizin low producing strain	18.979
DRR006524	Root Summer glycyrrhizin low producing strain	19.208
DRR006525	Leaf Summer glycyrrhizin high producing strain	52.269
DRR006526	Leaf Summer glycyrrhizin high producing strain	52.394

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	30.916
SRR2868004	Drought Stress(Tissue:root)	33.161
SRR2967015	Control (Tissue:root)	24.554

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	41.301
SRR9715740	Leave	40.110
SRR9715741	Leave	48.241
SRR9715739	Root	6.852
SRR9715742	Root	25.799
SRR9715743	Root	21.668

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.202
SRR8749028	MeJA induced 9h	0.914
SRR8749029	MeJA induced 9h	0.615
SRR8749030	Uninduced	0.729
SRR8749031	Uninduced	0.396
SRR8749032	Uninduced	0.318

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	33.328
SRR8400027	Control-Root	31.706