Gene detail information of Glyur000581s00027349.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39000.1 | 4.00E-83 | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| NR | XP_003518308.1 | 1.47E-135 | PREDICTED: uncharacterized protein LOC100803930 [Glycine max] |
| COG | YP_007144194.1 | 2.00E-10 | N-acetyltransferase GCN5 [Crinalium epipsammum PCC 9333] |
| trEMBL | tr|I1JD76|I1JD76_SOYBN | 6.00E-136 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G08160.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00581 | 101428 | 103945 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GNAT |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000581s00027349.1 | PF00583.19 | Acetyltransf_1 | 195 | 261 | 5.30E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.576 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.462 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.213 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.407 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.488 |
| SRR2967015 | Control (Tissue:root) | 0.240 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 20.473 |
| SRR9715740 | Leave | 41.393 |
| SRR9715741 | Leave | 21.209 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.093 |
| SRR8400027 | Control-Root | 0.113 |