Gene detail information of Glyur000585s00027743.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G18160.10Protein kinase superfamily protein
NRXP_003528971.10PREDICTED: serine/threonine-protein kinase EDR1-like [Glycine max]
COGYP_001958461.15.00E-48hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9FPR3|EDR1_ARATH1.00E-142Serine/threonine-protein kinase EDR1
trEMBLtr|I1KJ44|I1KJ44_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G11430.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005853617846073-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000585s00027743.1PF14381.1EDR11593651.40E-70
Glyur000585s00027743.1PF07714.12Pkinase_Tyr75610071.80E-66


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.307
SRR1783600control1.317
SRR1783602moderate drought stress1.386
SRR1811619moderate drought stress1.350

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.728
DRR006520Root Summer glycyrrhizin high producing strain0.634
DRR006521Root Winter glycyrrhizin high producing strain0.068
DRR006522Root Winter glycyrrhizin high producing strain0.066
DRR006523Root Summer glycyrrhizin low producing strain1.024
DRR006524Root Summer glycyrrhizin low producing strain0.876
DRR006525Leaf Summer glycyrrhizin high producing strain0.765
DRR006526Leaf Summer glycyrrhizin high producing strain0.709

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.532
SRR2868004Drought Stress(Tissue:root)22.422
SRR2967015Control (Tissue:root)22.368

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.361
SRR9715740Leave4.290
SRR9715741Leave9.666
SRR9715739Root1.389
SRR9715742Root3.090
SRR9715743Root3.369

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.067
SRR8749028MeJA induced 9h2.896
SRR8749029MeJA induced 9h2.549
SRR8749030Uninduced5.298
SRR8749031Uninduced6.526
SRR8749032Uninduced1.863

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.708
SRR8400027Control-Root9.681

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved