Gene detail information of Glyur000585s00027748.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G18080.12.00E-151B-S glucosidase 44
NRXP_002281407.10PREDICTED: beta-glucosidase 44 [Vitis vinifera]
COGYP_004449345.12.00E-114beta-galactosidase [Haliscomenobacter hydrossis DSM 1100]
Swissprottr|Q5QMT0|BGL01_ORYSJ0Beta-glucosidase 1 (Precursor)
trEMBLtr|D7SJ82|D7SJ82_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI15543.3}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00585117278121647+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05350bglB EC:3.2.1.21 Starch and sucrose metabolism map00500
Cyanoamino acid metabolismmap00460
Phenylpropanoid biosynthesismap00940


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000585s00027748.1PF00232.13Glyco_hydro_1453388.10E-104
Glyur000585s00027748.1PF00232.13Glyco_hydro_13414527.70E-38


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.835
SRR1783600control7.821
SRR1783602moderate drought stress4.970
SRR1811619moderate drought stress4.940

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.431
DRR006520Root Summer glycyrrhizin high producing strain3.608
DRR006521Root Winter glycyrrhizin high producing strain0.411
DRR006522Root Winter glycyrrhizin high producing strain0.359
DRR006523Root Summer glycyrrhizin low producing strain2.087
DRR006524Root Summer glycyrrhizin low producing strain1.918
DRR006525Leaf Summer glycyrrhizin high producing strain21.549
DRR006526Leaf Summer glycyrrhizin high producing strain21.293

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)25.458
SRR2868004Drought Stress(Tissue:root)13.142
SRR2967015Control (Tissue:root)16.407

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave22.713
SRR9715740Leave11.281
SRR9715741Leave9.717
SRR9715739Root3.968
SRR9715742Root4.951
SRR9715743Root4.908

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h35.984
SRR8749028MeJA induced 9h21.432
SRR8749029MeJA induced 9h23.626
SRR8749030Uninduced0.819
SRR8749031Uninduced1.031
SRR8749032Uninduced2.362

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root29.655
SRR8400027Control-Root28.745

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved