Gene detail information of Glyur000585s00027750.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G18100.1 | 3.00E-145 | myb domain protein 4r1 |
| NR | XP_004512739.1 | 0 | PREDICTED: uncharacterized protein LOC101490682 isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q9S7G7|MB3R1_ARATH | 2.00E-25 | Myb-related protein 3R-1 |
| trEMBL | tr|G8A0D0|G8A0D0_MEDTR | 0 | Myb-like DNA-binding protein BAS1 {ECO:0000313|EMBL:AES84918.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00585 | 130072 | 136981 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000585s00027750.1 | PF13921.1 | Myb_DNA-bind_6 | 446 | 511 | 1.20E-14 |
| Glyur000585s00027750.1 | PF13921.1 | Myb_DNA-bind_6 | 554 | 613 | 5.90E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.889 |
| SRR1783600 | control | 3.835 |
| SRR1783602 | moderate drought stress | 5.496 |
| SRR1811619 | moderate drought stress | 5.497 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.826 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.784 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.620 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.258 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.385 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.432 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.231 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.669 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.328 |
| SRR2967015 | Control (Tissue:root) | 6.269 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 6.913 |
| SRR9715740 | Leave | 8.328 |
| SRR9715741 | Leave | 7.338 |
| SRR9715739 | Root | 0.503 |
| SRR9715742 | Root | 5.075 |
| SRR9715743 | Root | 4.415 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.353 |
| SRR8749028 | MeJA induced 9h | 7.026 |
| SRR8749029 | MeJA induced 9h | 7.240 |
| SRR8749030 | Uninduced | 4.759 |
| SRR8749031 | Uninduced | 6.337 |
| SRR8749032 | Uninduced | 6.803 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 6.651 |
| SRR8400027 | Control-Root | 5.698 |