Gene detail information of Glyur000586s00021846.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G71070.1 | 2.00E-73 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| NR | XP_003530179.1 | 0 | PREDICTED: xylosyltransferase 1-like [Glycine max] |
| trEMBL | tr|I1KGP7|I1KGP7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G02330.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00586 | 77540 | 80530 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT14 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000586s00021846.1 | PF02485.16 | Branch | 68 | 297 | 3.60E-40 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.121 |
| SRR1783600 | control | 2.204 |
| SRR1783602 | moderate drought stress | 1.136 |
| SRR1811619 | moderate drought stress | 1.043 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.332 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.137 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.872 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.001 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.049 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.823 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.595 |
| SRR2967015 | Control (Tissue:root) | 4.332 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.769 |
| SRR9715740 | Leave | 0.310 |
| SRR9715741 | Leave | 0.198 |
| SRR9715739 | Root | 0.472 |
| SRR9715742 | Root | 2.654 |
| SRR9715743 | Root | 2.314 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.833 |
| SRR8749028 | MeJA induced 9h | 0.951 |
| SRR8749029 | MeJA induced 9h | 0.284 |
| SRR8749030 | Uninduced | 0.042 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 10.031 |
| SRR8400027 | Control-Root | 17.425 |