Gene detail information of Glyur000586s00021847.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G21150.18.00E-18B-box 32
NRXP_003530172.11.71E-90PREDICTED: uncharacterized protein LOC100781783 [Glycine max]
Swissprottr|Q9LJB7|BBX32_ARATH2.00E-23B-box zinc finger protein 32 {ECO:0000303|PubMed:19920209}
trEMBLtr|I1KGP6|I1KGP6_SOYBN6.00E-91Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G02320.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005868441485157-


Gene family

Gene familysubfamily
Transcription Factors FamilyOrphans


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0005622  intracellular


molecular_function

GO:0008270  zinc ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000586s00021847.1PF00643.19zf-B_box6497.30E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.458
SRR1783600control3.378
SRR1783602moderate drought stress14.304
SRR1811619moderate drought stress14.209

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.775
DRR006520Root Summer glycyrrhizin high producing strain2.512
DRR006521Root Winter glycyrrhizin high producing strain6.134
DRR006522Root Winter glycyrrhizin high producing strain6.253
DRR006523Root Summer glycyrrhizin low producing strain3.796
DRR006524Root Summer glycyrrhizin low producing strain4.278
DRR006525Leaf Summer glycyrrhizin high producing strain5.355
DRR006526Leaf Summer glycyrrhizin high producing strain5.972

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.865
SRR2868004Drought Stress(Tissue:root)24.168
SRR2967015Control (Tissue:root)11.143

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.921
SRR9715740Leave22.771
SRR9715741Leave19.779
SRR9715739Root9.531
SRR9715742Root5.954
SRR9715743Root8.160

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.821
SRR8749028MeJA induced 9h15.618
SRR8749029MeJA induced 9h17.954
SRR8749030Uninduced7.467
SRR8749031Uninduced6.050
SRR8749032Uninduced11.198

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.934
SRR8400027Control-Root3.974

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved