Gene detail information of Glyur000587s00026614.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G24930.13.00E-85CONSTANS-like 4
NRXP_004498823.12.55E-173PREDICTED: zinc finger protein CONSTANS-LIKE 4-like [Cicer arietinum]
Swissprottr|Q940T9|COL4_ARATH7.00E-104Zinc finger protein CONSTANS-LIKE 4
trEMBLtr|Q52ZI7|Q52ZI7_PEA1.00E-173CONSTANS-LIKE b {ECO:0000313|EMBL:AAX47173.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005872723528855-


Gene family

Gene familysubfamily
Transcription Factors FamilyDBB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

cellular_component

GO:0005622  intracellular


molecular_function

GO:0005515  protein binding

GO:0008270  zinc ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000587s00026614.1PF00643.19zf-B_box4487.30E-06
Glyur000587s00026614.1PF00643.19zf-B_box46911.10E-06
Glyur000587s00026614.1PF06203.9CCT2412849.30E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.550
SRR1783600control0.574
SRR1783602moderate drought stress2.075
SRR1811619moderate drought stress2.038

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.159
DRR006520Root Summer glycyrrhizin high producing strain9.354
DRR006521Root Winter glycyrrhizin high producing strain0.291
DRR006522Root Winter glycyrrhizin high producing strain0.284
DRR006523Root Summer glycyrrhizin low producing strain4.702
DRR006524Root Summer glycyrrhizin low producing strain4.502
DRR006525Leaf Summer glycyrrhizin high producing strain123.422
DRR006526Leaf Summer glycyrrhizin high producing strain123.358

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)33.481
SRR2868004Drought Stress(Tissue:root)51.375
SRR2967015Control (Tissue:root)26.394

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave221.658
SRR9715740Leave271.707
SRR9715741Leave240.140
SRR9715739Root0.452
SRR9715742Root6.645
SRR9715743Root3.364

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.548
SRR8749028MeJA induced 9h9.653
SRR8749029MeJA induced 9h13.209
SRR8749030Uninduced1.251
SRR8749031Uninduced0.483
SRR8749032Uninduced1.023

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.835
SRR8400027Control-Root6.400

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved