Gene detail

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Gene detail information of Glyur000587s00026619.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G10720.1	0	histidine kinase 5
NR	KHN19660.1	0	Histidine kinase 5 [Glycine soja]
COG	YP_001995522.1	8.00E-44	multi-sensor hybrid histidine kinase [Chloroherpeton thalassium ATCC 35110]
Swissprot	tr\|Q3S4A7\|AHK5_ARATH	0	Histidine kinase 5
trEMBL	tr\|K7M630\|K7M630_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA14G12330.2}

Sequence

Transcript Sequence

>Glyur000587s00026619.1
ATGGACATTGAAGTCCTCTCTTCAATGTGGCCTGAAGATGTTGGAACTGATGTTGGAAAACAGTTCAATATAGAAAAGCCTGGAAGGGACCAAGATATGTTAGAGGAGGTCACAATCTTAGAGGAGCCAACCATAGCTGATTTTCAGCGCCTCATGGAGCTTACAAATTATACAGATAAAGGGTCTTCTCAGTTGGCATACCTTATGAAACACTGGGAGTATAAGCAGGCTAATGCGGTGCGTCTTCTGCGGGAAGAGCTTGACAACCTTAACAAACAAAGGAAGGAAGTTGAGCTTAGAAAATTGGAGATNCTGAAAGACAATCGGTTCGAGGAAGAAAATTACGGGGGCGACAAGCGACCGGTTTCTATATTGGATGATGTTTATTACACATGGCAAGATCTACCAGTACCACTCAGGAAAAGTGATGTTGTTGTTCAAAACAAGAGAATTGAAATTGATGCTGAGTATGATACTGTTGTGTACTGGAAACAGCGGGCCGCGGATTTAGAAAGACAGTTGGAGGCAAGCATCCAGAGGGAGCAGATACTTGTGGAAAAGTTGCAAGAAAGTATAAAGAATATTGAGAGACAGGCCTCACCTGTTGAGGAACTCTCTCAGATTCTGAAGAGGGCAGATAATTTCTTACACTTTATACTTCAAAATGCACCTGTTGTTATTGGCCATCAGGACAAAGAGTTGCGCTATCGCTTTATCTATAATCATTTTCCAAGTTTACAAGAGGAGGATATCATAGGAAAAACGGATGTTGAAATTTTCACAGGATCTGGTGTTAAGGAATCTCAAGATTTCAAGAGAGAAGTAATGGAGAAAGGATTACCTGCAAAAAAGGAAATTACTTTCGAGACAGAACTATTCGGATCAAAGACATTCTTGATATATGTAGAACCTGTGTTTAGCAAGGCAGGGGAGACAATAGGAATAAATTATATGGGAATGGAAATAACAGATCAGGTGAGAAAAAGAGAAAGAATGGCAAAGCTAAGGGAAGAGATTGCAGTTCAGAAAGCCAAGGAAACAGAACTTAATAAAACCATTCACATTACAGAGGAGACTATGAGAGCGAAACAAATGCTAGCAACAATGTCTCATGAGATAAGATCTCCACTGTCTGGAGTTGTTAGCATGGCTGAAATTCTTTCCACCACAAAACTTGATCGAGAGCAAAGACAGCTCTTGGATGTCATGATATCTTCAGGAGATTTGGTTCTTCAACTTATAAATGACATACTTGATCTTTCCAAAGTTGAGTCAGGAGCTATGAAATTGGAAGCTACCAAATTCCGGCCAAGAGAGGTAGTGAAGCATGTACTCCAGACAGCTGCAGCATCATTGCAGAAAATGTTAACCTTAGAAGGAAATGTGGCAGATGATATACCTATTGAGGTCACCGGAGACGTTTTAAGGATCCGGCAGATTCTCACAAATTTAGTCAGCAATGCGGTCAAGTTTACACATGAAGGCAAAGTTGGTATAAACCTTTACGTTGTTCCAGAGCCACCATTTGCCAAAGCAGAAGAAGGTCACCAAAAGGTGACCACAGACCAGTCAACTACTTCAGAGAATGGGTTGAATGAAGAGAAACATAATCTATCAACACCTCGAAGTAGATGTGATCATCAAAACCTTCTTGATGGTAAAAAACACAATGACCATCCCACCGAAAATCATCATGCATTTAACAACGATGAATGTAGATCTTCAGTTAACAGTGATTGCTCAATGAATGGAGATACCGAGGAGCAAACTCATTCAACTGAAACGACAGTGTGGATACGTTGTGATGTATATGACACAGGAATTGGAATACCAGAAAAGGCTATACCTACTTTATTTAGAAGGTACATGCAAGTCAGTGCAGACCACGCTAGAAAATATGGAGGCACGGGGCTAGGACTAGCAATATGCAAACAACTGGTTGAGTTAATGGGTGGTCATCTAACAGTGTCTAGCAAAGAACATTGTGGTTCTACCTTCACGTTCATACTTCCATACAAGGTCTCGACCGCTTGTGATAACTCCGATGACCCTGATGAGCTTTCAGATGTGGATAATGATGAAGATGATACAACAGAGGGATTCTTCCAATTCCAACCACGCACTTTGGGCTCTCTTTTCTCCTCTAATGGATCTAGCAGGCCACAAAATATATTACCTGGCTACAGAAGCTCACACAAGTTAAATGGATTTCCTCAAAATTCTTACTCATTGCCCTCTAGTGACATCAGATCAAAAGGGTCAAGTTCAGTTGAGGATGCATCTTCAGTTATTGTTGATGCTCCAGATATGTCTGAATCAACAAGCTCTTCAAGTCACAGCCCTGAAACAAAGCATGAAAGTTTAGTTAATGGAAACAAACAGAACCAAGATAAGGCACATCCTCAGTTGCAAAATGGTAGTGTAGACTCATGTCAACTTAAGGAGGCAAGTAGAGAAATGACTTATCAGTTGCAAAATGGTAATGTAGACTCTTGTCAACTTAAGGAGTCATGTAGAGAAATGACATTACCAACAAAGCCAAGTGAANCCCAGCAAACATGTCAGGGTCAAGGGAAGGCAGACATAACTTCTCAATGTGTTATTAGCAGTAGTAGCACTAGCACCTCGTCGGAAGTAACCAAACCCACATTAAAGCCAAAGATTCTTCTTGTTGAAGATAACAAGATTAATATCATGGTGACACAGTCAATGATGAAGCAATTAGGTTATAGCATGGATGTTGTGAATAATGGAGTGGAAGCCGTACATGCAGTTCAGCGCAATTCTTATGACCTCATTCTAATGGATGTTTACATGCCAGTTATGAATGGTCTTCAAACAACAAAACTGATTCGGTCTTATGAGGAAACGGGCAATTGGGATGCAGCAAGAAAAGCTGGAATTGAACAAAGTTTATCTACTTCAGATGAATGTTCTGTACCACCTAAAAAGCGTATCCACATTATCGCGATGACAGCAAACACATTGTCAGAGAGTGCTGAAGAATGTTTTGCGAATGGTATGGACTCGTTTGTGTCAAAACCTGTGACATTCCAGAAATTGAAAGAGTGTCTAGAACAGTACCTA

Protein Sequence

>Glyur000587s00026619.1
MDIEVLSSMWPEDVGTDVGKQFNIEKPGRDQDMLEEVTILEEPTIADFQRLMELTNYTDKGSSQLAYLMKHWEYKQANAVRLLREELDNLNKQRKEVELRKLEXLKDNRFEEENYGGDKRPVSILDDVYYTWQDLPVPLRKSDVVVQNKRIEIDAEYDTVVYWKQRAADLERQLEASIQREQILVEKLQESIKNIERQASPVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPSLQEEDIIGKTDVEIFTGSGVKESQDFKREVMEKGLPAKKEITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMEITDQVRKRERMAKLREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLDREQRQLLDVMISSGDLVLQLINDILDLSKVESGAMKLEATKFRPREVVKHVLQTAAASLQKMLTLEGNVADDIPIEVTGDVLRIRQILTNLVSNAVKFTHEGKVGINLYVVPEPPFAKAEEGHQKVTTDQSTTSENGLNEEKHNLSTPRSRCDHQNLLDGKKHNDHPTENHHAFNNDECRSSVNSDCSMNGDTEEQTHSTETTVWIRCDVYDTGIGIPEKAIPTLFRRYMQVSADHARKYGGTGLGLAICKQLVELMGGHLTVSSKEHCGSTFTFILPYKVSTACDNSDDPDELSDVDNDEDDTTEGFFQFQPRTLGSLFSSNGSSRPQNILPGYRSSHKLNGFPQNSYSLPSSDIRSKGSSSVEDASSVIVDAPDMSESTSSSSHSPETKHESLVNGNKQNQDKAHPQLQNGSVDSCQLKEASREMTYQLQNGNVDSCQLKESCREMTLPTKPSEXQQTCQGQGKADITSQCVISSSSTSTSSEVTKPTLKPKILLVEDNKINIMVTQSMMKQLGYSMDVVNNGVEAVHAVQRNSYDLILMDVYMPVMNGLQTTKLIRSYEETGNWDAARKAGIEQSLSTSDECSVPPKKRIHIIAMTANTLSESAEECFANGMDSFVSKPVTFQKLKECLEQYL

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00587	42473	48086	-

Gene family

Gene family	subfamily
Transcription Factors Family	Orphans

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0000160 phosphorelay signal transduction system

GO:0007165 signal transduction

GO:0016310 phosphorylation

cellular_component GO:0016020 membrane molecular_function GO:0000155 phosphorelay sensor kinase activity GO:0004871 signal transducer activity GO:0016772 transferase activity, transferring phosphorus-containing groups "

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000587s00026619.1	PF00512.20	HisKA	363	426	7.00E-18
Glyur000587s00026619.1	PF02518.21	HATPase_c	472	672	4.00E-29
Glyur000587s00026619.1	PF00072.19	Response_reg	888	956	7.80E-14

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.036
SRR1783600	control	0.036
SRR1783602	moderate drought stress	0.061
SRR1811619	moderate drought stress	0.061

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.070
DRR006520	Root Summer glycyrrhizin high producing strain	0.069
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.120
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.117

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	9.938
SRR2868004	Drought Stress(Tissue:root)	9.021
SRR2967015	Control (Tissue:root)	9.745

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.100
SRR9715740	Leave	0.000
SRR9715741	Leave	0.029
SRR9715739	Root	0.000
SRR9715742	Root	0.000
SRR9715743	Root	0.024

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.312
SRR8749028	MeJA induced 9h	0.076
SRR8749029	MeJA induced 9h	0.297
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.046

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.810
SRR8400027	Control-Root	0.720