Gene detail information of Glyur000588s00020436.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G67720.16.00E-159Leucine-rich repeat protein kinase family protein
NRKHN24106.10Putative LRR receptor-like serine/threonine-protein kinase [Glycine soja]
COGYP_004579826.17.00E-12hypothetical protein [Lacinutrix sp. 5H-3-7-4]
Swissprottr|C0LGI2|Y1677_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At1g67720 (Precursor)
trEMBLtr|K7MPC0|K7MPC0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G01450.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0058819255935-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.8.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000588s00020436.1PF12819.2Malectin_like1961.40E-07
Glyur000588s00020436.1PF07714.12Pkinase_Tyr3414462.50E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control24.977
SRR1783600control25.081
SRR1783602moderate drought stress19.125
SRR1811619moderate drought stress19.524

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.812
DRR006520Root Summer glycyrrhizin high producing strain24.537
DRR006521Root Winter glycyrrhizin high producing strain11.284
DRR006522Root Winter glycyrrhizin high producing strain10.745
DRR006523Root Summer glycyrrhizin low producing strain18.620
DRR006524Root Summer glycyrrhizin low producing strain18.656
DRR006525Leaf Summer glycyrrhizin high producing strain8.389
DRR006526Leaf Summer glycyrrhizin high producing strain8.419

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.990
SRR2868004Drought Stress(Tissue:root)18.599
SRR2967015Control (Tissue:root)22.160

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.170
SRR9715740Leave8.140
SRR9715741Leave9.162
SRR9715739Root2.430
SRR9715742Root12.901
SRR9715743Root9.834

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.588
SRR8749028MeJA induced 9h0.157
SRR8749029MeJA induced 9h0.444
SRR8749030Uninduced1.037
SRR8749031Uninduced0.461
SRR8749032Uninduced0.678

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root34.100
SRR8400027Control-Root37.978

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved