Gene detail information of Glyur000588s00020440.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G67710.12.00E-90response regulator 11
NRKHN24104.10Two-component response regulator ARR11 [Glycine soja]
COGYP_462742.19.00E-17sigma-54-dependent transcriptional regulator [Syntrophus aciditrophicus SB]
Swissprottr|Q9FXD6|ARR11_ARATH5.00E-116Two-component response regulator ARR11
trEMBLtr|G7J2J3|G7J2J3_MEDTR0Two-component response regulator ARR2-like protein {ECO:0000313|EMBL:AES72100.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005882466928968+


Gene family

Gene familysubfamily
Transcription Factors FamilyARR-B


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0000160  phosphorelay signal transduction system


molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000588s00020440.1PF00072.19Response_reg191272.40E-23
Glyur000588s00020440.1PF00249.26Myb_DNA-binding2022503.20E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.112
SRR1783600control13.114
SRR1783602moderate drought stress9.678
SRR1811619moderate drought stress9.678

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.212
DRR006520Root Summer glycyrrhizin high producing strain17.028
DRR006521Root Winter glycyrrhizin high producing strain5.808
DRR006522Root Winter glycyrrhizin high producing strain5.755
DRR006523Root Summer glycyrrhizin low producing strain13.647
DRR006524Root Summer glycyrrhizin low producing strain12.777
DRR006525Leaf Summer glycyrrhizin high producing strain0.966
DRR006526Leaf Summer glycyrrhizin high producing strain0.951

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.798
SRR2868004Drought Stress(Tissue:root)26.322
SRR2967015Control (Tissue:root)27.833

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.574
SRR9715740Leave0.625
SRR9715741Leave0.877
SRR9715739Root1.305
SRR9715742Root5.092
SRR9715743Root3.808

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.221
SRR8749028MeJA induced 9h0.090
SRR8749029MeJA induced 9h0.090
SRR8749030Uninduced0.254
SRR8749031Uninduced0.135
SRR8749032Uninduced0.032

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.729
SRR8400027Control-Root9.593

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved