Gene detail information of Glyur000588s00020453.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G13450.14.00E-153Homeodomain-like superfamily protein
NRXP_007163722.10hypothetical protein PHAVU_001G258700g [Phaseolus vulgaris]
Swissprottr|Q9FX53|TGT1_ARATH0Trihelix transcription factor GT-1
trEMBLtr|V7D3B0|V7D3B0_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW35716.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0058897289103141+


Gene family

Gene familysubfamily
Transcription Factors FamilyTrihelix


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006351  transcription, DNA-templated


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding

GO:0003700  transcription factor activity, sequence-specific DNA binding

"

Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000588s00020453.1PF13837.1Myb_DNA-bind_4731581.20E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.542
SRR1783600control13.684
SRR1783602moderate drought stress13.342
SRR1811619moderate drought stress13.235

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.958
DRR006520Root Summer glycyrrhizin high producing strain16.616
DRR006521Root Winter glycyrrhizin high producing strain20.431
DRR006522Root Winter glycyrrhizin high producing strain19.769
DRR006523Root Summer glycyrrhizin low producing strain14.485
DRR006524Root Summer glycyrrhizin low producing strain14.574
DRR006525Leaf Summer glycyrrhizin high producing strain11.998
DRR006526Leaf Summer glycyrrhizin high producing strain11.865

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.083
SRR2868004Drought Stress(Tissue:root)11.814
SRR2967015Control (Tissue:root)13.130

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.049
SRR9715740Leave7.994
SRR9715741Leave8.478
SRR9715739Root7.079
SRR9715742Root7.673
SRR9715743Root7.476

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.911
SRR8749028MeJA induced 9h18.325
SRR8749029MeJA induced 9h13.790
SRR8749030Uninduced12.935
SRR8749031Uninduced10.106
SRR8749032Uninduced8.198

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.089
SRR8400027Control-Root15.632

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved