Gene detail information of Glyur000590s00022559.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G38240.21.00E-109alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative
NRXP_004500686.11.59E-158PREDICTED: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like isoform X1 [Cicer arietinum]
Swissprottr|Q9XGM8|MGAT1_ARATH2.00E-135Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
trEMBLtr|I1K6U7|I1K6U7_SOYBN1.00E-156Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G00230.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005905332676040+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT13


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00726MGAT1 EC:2.4.1.101 N-Glycan biosynthesis map00510
Various types of N-glycan biosynthesismap00513


Gene Ontology

biological_process

GO:0006486  protein glycosylation


molecular_function

GO:0008375  acetylglucosaminyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000590s00022559.1PF03071.10GNT-I12314.40E-124


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.467
SRR1783600control6.605
SRR1783602moderate drought stress11.021
SRR1811619moderate drought stress11.053

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.006
DRR006520Root Summer glycyrrhizin high producing strain20.792
DRR006521Root Winter glycyrrhizin high producing strain21.686
DRR006522Root Winter glycyrrhizin high producing strain20.860
DRR006523Root Summer glycyrrhizin low producing strain21.326
DRR006524Root Summer glycyrrhizin low producing strain20.710
DRR006525Leaf Summer glycyrrhizin high producing strain13.216
DRR006526Leaf Summer glycyrrhizin high producing strain12.737

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)28.541
SRR2868004Drought Stress(Tissue:root)28.771
SRR2967015Control (Tissue:root)27.170

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave24.690
SRR9715740Leave23.894
SRR9715741Leave28.135
SRR9715739Root1.909
SRR9715742Root8.673
SRR9715743Root8.293

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h35.892
SRR8749028MeJA induced 9h31.589
SRR8749029MeJA induced 9h37.474
SRR8749030Uninduced42.396
SRR8749031Uninduced41.582
SRR8749032Uninduced31.806

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root27.191
SRR8400027Control-Root27.332

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved