Gene detail information of Glyur000591s00018659.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G26330.10Leucine-rich receptor-like protein kinase family protein
NRKHN37058.10LRR receptor-like serine/threonine-protein kinase ERECTA [Glycine soja]
COGYP_004775215.13.00E-58RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q42371|ERECT_ARATH0LRR receptor-like serine/threonine-protein kinase ERECTA {ECO:0000303|PubMed:8624444} (Precursor)
trEMBLtr|I1MX81|I1MX81_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G34380.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005913807346212+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K20718ER EC:2.7.11.1 MAPK signaling pathway - plant map04016


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000591s00018659.2PF08263.7LRRNT_2761121.20E-07
Glyur000591s00018659.2PF13855.1LRR_81412001.80E-06
Glyur000591s00018659.2PF00560.28LRR_12132301.1
Glyur000591s00018659.2PF00560.28LRR_12873050.13
Glyur000591s00018659.2PF00560.28LRR_13333540.74
Glyur000591s00018659.2PF00560.28LRR_13804020.38
Glyur000591s00018659.2PF13855.1LRR_84765352.40E-09
Glyur000591s00018659.2PF00069.20Pkinase7298202.00E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.210
SRR1783600control3.259
SRR1783602moderate drought stress3.180
SRR1811619moderate drought stress3.161

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.544
DRR006520Root Summer glycyrrhizin high producing strain3.516
DRR006521Root Winter glycyrrhizin high producing strain0.043
DRR006522Root Winter glycyrrhizin high producing strain0.060
DRR006523Root Summer glycyrrhizin low producing strain21.380
DRR006524Root Summer glycyrrhizin low producing strain21.533
DRR006525Leaf Summer glycyrrhizin high producing strain23.830
DRR006526Leaf Summer glycyrrhizin high producing strain23.992

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.082
SRR2868004Drought Stress(Tissue:root)0.133
SRR2967015Control (Tissue:root)0.094

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave30.676
SRR9715740Leave28.250
SRR9715741Leave20.962
SRR9715739Root1.151
SRR9715742Root2.893
SRR9715743Root2.270

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.020
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.049
SRR8749030Uninduced0.018
SRR8749031Uninduced0.042
SRR8749032Uninduced0.008

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.712
SRR8400027Control-Root2.276

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved