Gene detail information of Glyur000592s00020598.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G28650.10Leucine-rich repeat transmembrane protein kinase family protein
NRXP_004495057.10PREDICTED: leucine-rich repeat receptor-like protein kinase PXL2-like [Cicer arietinum]
COGYP_004775215.16.00E-59RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9M0G7|PXL2_ARATH0Leucine-rich repeat receptor-like protein kinase PXL2 (Precursor)
trEMBLtr|A0A072VLH9|A0A072VLH9_MEDTR0LRR receptor-like kinase family protein {ECO:0000313|EMBL:KEH42461.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00592112969116544+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000592s00020598.1PF08263.7LRRNT_229742.10E-07
Glyur000592s00020598.1PF13516.1LRR_61241461.8
Glyur000592s00020598.1PF13504.1LRR_71992123
Glyur000592s00020598.1PF13516.1LRR_63663871.4
Glyur000592s00020598.1PF13855.1LRR_84865467.60E-10
Glyur000592s00020598.1PF00560.28LRR_15605780.65
Glyur000592s00020598.1PF00069.20Pkinase7149621.70E-48


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.934
SRR1783600control1.893
SRR1783602moderate drought stress0.211
SRR1811619moderate drought stress0.255

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.169
DRR006520Root Summer glycyrrhizin high producing strain0.166
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.034
DRR006524Root Summer glycyrrhizin low producing strain0.029
DRR006525Leaf Summer glycyrrhizin high producing strain0.692
DRR006526Leaf Summer glycyrrhizin high producing strain0.624

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.095
SRR2868004Drought Stress(Tissue:root)3.074
SRR2967015Control (Tissue:root)2.393

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.225
SRR9715740Leave0.382
SRR9715741Leave0.576
SRR9715739Root0.363
SRR9715742Root0.431
SRR9715743Root0.333

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.010
SRR8749029MeJA induced 9h0.009
SRR8749030Uninduced0.000
SRR8749031Uninduced0.203
SRR8749032Uninduced0.299

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.353
SRR8400027Control-Root1.720

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved