Gene detail information of Glyur000593s00016423.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G58500.13.00E-177protein phosphatase 2A-4
NRXP_003533904.10PREDICTED: serine/threonine-protein phosphatase PP2A-3 catalytic subunit-like isoformX1 [Glycine max]
COGYP_001541554.11.00E-37metallophosphoesterase [Caldivirga maquilingensis IC-167]
Swissprottr|P48578|PP2A3_ARATH0Serine/threonine-protein phosphatase PP2A-3 catalytic subunit
trEMBLtr|I1L2I7|I1L2I7_SOYBN0Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005933087537231+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04382PPP2C EC:3.1.3.16 mRNA surveillance pathway map03015
MAPK signaling pathway - flymap04013
TGF-beta signaling pathwaymap04350
Hippo signaling pathwaymap04390
Hippo signaling pathway -flymap04391
Sphingolipid signaling pathwaymap04071
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
Autophagy - animalmap04140
Autophagy - yeastmap04138
Cell cycle - yeastmap04111
Meiosis - yeastmap04113
Oocyte meiosismap04114
Tight junctionmap04530
Adrenergic signaling in cardiomyocytesmap04261
Dopaminergic synapsemap04728
Long-term depressionmap04730
Hepatitis Cmap05160
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

molecular_function

GO:0016787  hydrolase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000593s00016423.1PF00149.23Metallophos562486.50E-38


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control30.212
SRR1783600control30.870
SRR1783602moderate drought stress30.416
SRR1811619moderate drought stress30.288

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain33.112
DRR006520Root Summer glycyrrhizin high producing strain33.393
DRR006521Root Winter glycyrrhizin high producing strain23.210
DRR006522Root Winter glycyrrhizin high producing strain22.602
DRR006523Root Summer glycyrrhizin low producing strain27.729
DRR006524Root Summer glycyrrhizin low producing strain27.321
DRR006525Leaf Summer glycyrrhizin high producing strain14.697
DRR006526Leaf Summer glycyrrhizin high producing strain15.609

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)30.739
SRR2868004Drought Stress(Tissue:root)33.389
SRR2967015Control (Tissue:root)26.480

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.460
SRR9715740Leave26.607
SRR9715741Leave22.913
SRR9715739Root14.400
SRR9715742Root20.821
SRR9715743Root15.424

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.764
SRR8749028MeJA induced 9h11.283
SRR8749029MeJA induced 9h7.039
SRR8749030Uninduced6.630
SRR8749031Uninduced1.714
SRR8749032Uninduced1.941

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root32.407
SRR8400027Control-Root33.478

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved