Gene detail information of Glyur000593s00016429.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G06620.14.00E-93SET domain protein 38
NRXP_004514157.19.36E-175PREDICTED: histone-lysine N-methyltransferase ATXR4-like [Cicer arietinum]
Swissprottr|Q9FG08|ATXR4_ARATH2.00E-122Histone-lysine N-methyltransferase ATXR4 (Precursor)
trEMBLtr|V7BIF3|V7BIF3_PHAVU4.00E-161Uncharacterized protein {ECO:0000313|EMBL:ESW17714.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005936153965739-


Gene family

Gene familysubfamily
Transcription Factors FamilySET


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000593s00016429.1PF00856.23SET2522903.70E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.344
SRR1783600control9.616
SRR1783602moderate drought stress7.030
SRR1811619moderate drought stress7.099

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.760
DRR006520Root Summer glycyrrhizin high producing strain8.612
DRR006521Root Winter glycyrrhizin high producing strain2.831
DRR006522Root Winter glycyrrhizin high producing strain2.656
DRR006523Root Summer glycyrrhizin low producing strain6.720
DRR006524Root Summer glycyrrhizin low producing strain7.512
DRR006525Leaf Summer glycyrrhizin high producing strain2.530
DRR006526Leaf Summer glycyrrhizin high producing strain2.743

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.990
SRR2868004Drought Stress(Tissue:root)11.536
SRR2967015Control (Tissue:root)10.917

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.589
SRR9715740Leave3.550
SRR9715741Leave2.757
SRR9715739Root7.308
SRR9715742Root3.971
SRR9715743Root4.196

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.911
SRR8749028MeJA induced 9h6.020
SRR8749029MeJA induced 9h6.347
SRR8749030Uninduced1.643
SRR8749031Uninduced0.995
SRR8749032Uninduced1.286

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.962
SRR8400027Control-Root11.440

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved