Gene detail information of Glyur000594s00025970.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G34650.11.00E-155Protein kinase superfamily protein
NRXP_004485993.10PREDICTED: protein kinase PINOID-like [Cicer arietinum]
COGYP_593464.17.00E-20serine/threonine protein kinase [Candidatus Koribacter versatilis Ellin345]
Swissprottr|O64682|PID_ARATH0Protein kinase PINOID
trEMBLtr|G7IP53|G7IP53_MEDTR0Serine/Threonine kinase family protein {ECO:0000313|EMBL:AES64138.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00594114765116645+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000594s00025970.1PF00069.20Pkinase1142689.90E-36
Glyur000594s00025970.1PF00069.20Pkinase3324391.30E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.936
SRR1783600control16.452
SRR1783602moderate drought stress10.959
SRR1811619moderate drought stress10.997

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.400
DRR006520Root Summer glycyrrhizin high producing strain9.661
DRR006521Root Winter glycyrrhizin high producing strain0.075
DRR006522Root Winter glycyrrhizin high producing strain0.073
DRR006523Root Summer glycyrrhizin low producing strain12.842
DRR006524Root Summer glycyrrhizin low producing strain12.577
DRR006525Leaf Summer glycyrrhizin high producing strain3.899
DRR006526Leaf Summer glycyrrhizin high producing strain3.888

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.490
SRR2868004Drought Stress(Tissue:root)3.538
SRR2967015Control (Tissue:root)4.415

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.997
SRR9715740Leave0.353
SRR9715741Leave0.754
SRR9715739Root67.376
SRR9715742Root26.058
SRR9715743Root34.025

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h54.718
SRR8749028MeJA induced 9h21.828
SRR8749029MeJA induced 9h7.529
SRR8749030Uninduced2.374
SRR8749031Uninduced0.287
SRR8749032Uninduced1.046

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.860
SRR8400027Control-Root6.392

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved