Gene detail information of Glyur000595s00018295.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G11600.14.00E-71glutathione peroxidase 6
NRXP_006579376.14.40E-116PREDICTED: uncharacterized protein LOC100527297 isoform X1 [Glycine max]
COGYP_003654553.12.00E-57peroxiredoxin [Arcobacter nitrofigilis DSM 7299]
Swissprottr|Q9LEF0|GPX4_MESCR4.00E-89Probable phospholipid hydroperoxide glutathione peroxidase
trEMBLtr|I1K5J3|I1K5J3_SOYBN2.00E-116Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005951426719699+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00432gpx EC:1.11.1.9 Arachidonic acid metabolism map00590
Glutathione metabolismmap00480
Thyroid hormone synthesismap04918


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004602  glutathione peroxidase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000595s00018295.2PF00255.14GSHPx441522.20E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control162.446
SRR1783600control164.989
SRR1783602moderate drought stress110.296
SRR1811619moderate drought stress111.299

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain179.466
DRR006520Root Summer glycyrrhizin high producing strain183.413
DRR006521Root Winter glycyrrhizin high producing strain280.819
DRR006522Root Winter glycyrrhizin high producing strain274.776
DRR006523Root Summer glycyrrhizin low producing strain348.427
DRR006524Root Summer glycyrrhizin low producing strain344.551
DRR006525Leaf Summer glycyrrhizin high producing strain64.041
DRR006526Leaf Summer glycyrrhizin high producing strain64.551

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)101.723
SRR2868004Drought Stress(Tissue:root)112.081
SRR2967015Control (Tissue:root)109.278

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave168.348
SRR9715740Leave137.800
SRR9715741Leave190.253
SRR9715739Root48.701
SRR9715742Root90.152
SRR9715743Root75.668

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h352.817
SRR8749028MeJA induced 9h389.019
SRR8749029MeJA induced 9h600.523
SRR8749030Uninduced535.189
SRR8749031Uninduced821.502
SRR8749032Uninduced608.747

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root114.600
SRR8400027Control-Root116.094

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved