Gene detail information of Glyur000595s00018300.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G44020.1 | 0 | Mitochondrial transcription termination factor family protein |
| NR | XP_003530919.1 | 0 | PREDICTED: uncharacterized protein LOC100809590 [Glycine max] |
| trEMBL | tr|I1KQC1|I1KQC1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G05110.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00595 | 47467 | 48795 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | mTERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000595s00018300.1 | PF02536.9 | mTERF | 47 | 392 | 4.70E-113 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.521 |
| SRR1783600 | control | 13.654 |
| SRR1783602 | moderate drought stress | 18.533 |
| SRR1811619 | moderate drought stress | 18.342 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.464 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.172 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.513 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.273 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.406 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.176 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.870 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.799 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 13.463 |
| SRR2868004 | Drought Stress(Tissue:root) | 12.934 |
| SRR2967015 | Control (Tissue:root) | 11.169 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.488 |
| SRR9715740 | Leave | 7.291 |
| SRR9715741 | Leave | 6.730 |
| SRR9715739 | Root | 13.072 |
| SRR9715742 | Root | 9.704 |
| SRR9715743 | Root | 10.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.977 |
| SRR8749028 | MeJA induced 9h | 6.038 |
| SRR8749029 | MeJA induced 9h | 4.572 |
| SRR8749030 | Uninduced | 7.466 |
| SRR8749031 | Uninduced | 2.758 |
| SRR8749032 | Uninduced | 3.500 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 10.856 |
| SRR8400027 | Control-Root | 11.709 |