Gene detail information of Glyur000596s00021308.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G03220.1 | 5.00E-180 | fucosyltransferase 1 |
| NR | XP_004508724.1 | 0 | PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like [Cicer arietinum] |
| Swissprot | tr|Q9M5Q1|FUT1_PEA | 0 | Galactoside 2-alpha-L-fucosyltransferase |
| trEMBL | tr|A0A072USA9|A0A072USA9_MEDTR | 0 | Galactoside 2-alpha-L-fucosyltransferase-like protein {ECO:0000313|EMBL:KEH31943.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00596 | 28226 | 30568 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT37 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000596s00021308.1 | PF03254.8 | XG_FTase | 94 | 545 | 4.10E-234 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.676 |
| SRR1783600 | control | 14.834 |
| SRR1783602 | moderate drought stress | 9.573 |
| SRR1811619 | moderate drought stress | 9.704 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.183 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.073 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.553 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.512 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.839 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.492 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.638 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.636 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.613 |
| SRR2967015 | Control (Tissue:root) | 5.843 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.127 |
| SRR9715740 | Leave | 0.973 |
| SRR9715741 | Leave | 0.556 |
| SRR9715739 | Root | 6.228 |
| SRR9715742 | Root | 6.497 |
| SRR9715743 | Root | 5.978 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.868 |
| SRR8749028 | MeJA induced 9h | 4.321 |
| SRR8749029 | MeJA induced 9h | 2.653 |
| SRR8749030 | Uninduced | 1.054 |
| SRR8749031 | Uninduced | 0.382 |
| SRR8749032 | Uninduced | 1.224 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.705 |
| SRR8400027 | Control-Root | 8.285 |