Gene detail information of Glyur000597s00020328.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | ABD93932.1 | 1.00E-06 | adenylate isopentenyltransferase [Lotus japonicus] |
| trEMBL | tr|Q1W5W5|Q1W5W5_LOTJA | 4.00E-07 | Adenylate isopentenyltransferase {ECO:0000313|EMBL:ABD93932.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00597 | 109282 | 109518 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K10760 | IPT | EC:2.5.1.27 2.5.1.112 | Zeatin biosynthesis | map00908 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.255 |
| SRR1783600 | control | 0.138 |
| SRR1783602 | moderate drought stress | 1.435 |
| SRR1811619 | moderate drought stress | 1.629 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.509 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.988 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.373 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.228 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.934 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.902 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.948 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.613 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.134 |
| SRR2967015 | Control (Tissue:root) | 0.444 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.134 |
| SRR9715741 | Leave | 0.393 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.072 |
| SRR8749028 | MeJA induced 9h | 0.109 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.309 |
| SRR8749031 | Uninduced | 0.138 |
| SRR8749032 | Uninduced | 0.039 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.333 |
| SRR8400027 | Control-Root | 0.672 |