Gene detail information of Glyur000597s00020334.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G03250.12.00E-87UDP-GLUCOSE PYROPHOSPHORYLASE 1
NRXP_004500712.10PREDICTED: UTP--glucose-1-phosphate uridylyltransferase-like [Cicer arietinum]
COGYP_006980131.11.00E-31UTP--glucose-1-phosphate uridylyltransferase [Propionibacterium acidipropionici ATCC 4875]
Swissprottr|Q9SDX3|UGPA_MUSAC8.00E-114UTP--glucose-1-phosphate uridylyltransferase
trEMBLtr|Q2PEV2|Q2PEV2_TRIPR0Putative UDP-glucose pyrophosphorylase {ECO:0000313|EMBL:BAE71250.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00597129334135115-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00963UGP2, galU, galF EC:2.7.7.9 Pentose and glucuronate interconversions map00040
Galactose metabolismmap00052
Starch and sucrose metabolismmap00500
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0006011  UDP-glucose metabolic process

GO:0006412  translation

GO:0008152  metabolic process


cellular_component

GO:0005622  intracellular

GO:0005840  ribosome


molecular_function

GO:0003735  structural constituent of ribosome

GO:0003983  UTP:glucose-1-phosphate uridylyltransferase activity

GO:0070569  uridylyltransferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000597s00020334.1PF00318.15Ribosomal_S2111954.60E-38
Glyur000597s00020334.1PF01704.13UDPGP2264002.90E-45
Glyur000597s00020334.1PF01704.13UDPGP4175401.50E-32


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.398
SRR1783600control15.138
SRR1783602moderate drought stress16.861
SRR1811619moderate drought stress16.854

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.061
DRR006520Root Summer glycyrrhizin high producing strain15.160
DRR006521Root Winter glycyrrhizin high producing strain9.657
DRR006522Root Winter glycyrrhizin high producing strain9.325
DRR006523Root Summer glycyrrhizin low producing strain14.944
DRR006524Root Summer glycyrrhizin low producing strain14.793
DRR006525Leaf Summer glycyrrhizin high producing strain11.124
DRR006526Leaf Summer glycyrrhizin high producing strain10.805

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.443
SRR2868004Drought Stress(Tissue:root)21.201
SRR2967015Control (Tissue:root)17.066

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.434
SRR9715740Leave12.374
SRR9715741Leave13.682
SRR9715739Root3.453
SRR9715742Root13.275
SRR9715743Root10.349

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h41.345
SRR8749028MeJA induced 9h29.129
SRR8749029MeJA induced 9h28.810
SRR8749030Uninduced9.214
SRR8749031Uninduced6.498
SRR8749032Uninduced9.046

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root24.965
SRR8400027Control-Root29.769

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved