Gene detail information of Glyur000598s00025089.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G80660.10H(+)-ATPase 9
NRXP_003543699.10PREDICTED: ATPase 9, plasma membrane-type-like [Glycine max]
COGYP_005270382.10plasma-membrane proton-efflux P-type ATPase [Acetobacterium woodii DSM 1030]
Swissprottr|Q42556|PMA9_ARATH0ATPase 9, plasma membrane-type
trEMBLtr|I1M5Y0|I1M5Y0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G44650.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005985469862457+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01535PMA1, PMA2 EC:3.6.3.6 Oxidative phosphorylation map00190


Gene Ontology

cellular_component

GO:0016021  integral component of membrane


molecular_function

GO:0000166  nucleotide binding

GO:0046872  metal ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000598s00025089.2PF00122.15E1-E2_ATPase1112731.00E-41
Glyur000598s00025089.2PF00702.21Hydrolase2776135.70E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.206
SRR1783600control4.230
SRR1783602moderate drought stress2.209
SRR1811619moderate drought stress2.241

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.247
DRR006520Root Summer glycyrrhizin high producing strain2.069
DRR006521Root Winter glycyrrhizin high producing strain0.890
DRR006522Root Winter glycyrrhizin high producing strain0.838
DRR006523Root Summer glycyrrhizin low producing strain1.604
DRR006524Root Summer glycyrrhizin low producing strain1.812
DRR006525Leaf Summer glycyrrhizin high producing strain0.211
DRR006526Leaf Summer glycyrrhizin high producing strain0.211

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.922
SRR2868004Drought Stress(Tissue:root)0.958
SRR2967015Control (Tissue:root)1.209

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.102
SRR9715740Leave0.159
SRR9715741Leave0.039
SRR9715739Root0.644
SRR9715742Root2.017
SRR9715743Root1.834

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.099
SRR8749028MeJA induced 9h0.027
SRR8749029MeJA induced 9h0.025
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.694
SRR8400027Control-Root2.589

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved