Gene detail information of Glyur000598s00025090.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G80660.1 | 3.00E-44 | H(+)-ATPase 9 |
| NR | KEH39623.1 | 1.41E-58 | plasma membrane H+-ATPase [Medicago truncatula] |
| Swissprot | tr|Q42556|PMA9_ARATH | 9.00E-51 | ATPase 9, plasma membrane-type |
| trEMBL | tr|A0A072VDU7|A0A072VDU7_MEDTR | 5.00E-59 | Plasma membrane H+-ATPase {ECO:0000313|EMBL:KEH39623.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00598 | 62166 | 62614 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01535 | PMA1, PMA2 | EC:3.6.3.6 | Oxidative phosphorylation | map00190 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.559 |
| SRR1783600 | control | 3.750 |
| SRR1783602 | moderate drought stress | 3.171 |
| SRR1811619 | moderate drought stress | 2.648 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.825 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.218 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.528 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.105 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.772 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.430 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.752 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.600 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.079 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.000 |
| SRR8400027 | Control-Root | 0.036 |