Gene detail information of Glyur000600s00022488.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G63770.2 | 6.00E-36 | Peptidase M1 family protein |
| NR | KHM99962.1 | 1.67E-47 | Aminopeptidase N [Glycine soja] |
| COG | NP_900846.1 | 1.00E-28 | aminopeptidase [Chromobacterium violaceum ATCC 12472] |
| Swissprot | tr|Q8H0S9|PSA_ARATH | 2.00E-41 | Puromycin-sensitive aminopeptidase |
| trEMBL | tr|I1K6H2|I1K6H2_SOYBN | 7.00E-48 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G37670.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00600 | 55489 | 57467 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01256 | pepN | EC:3.4.11.2 | Glutathione metabolism | map00480 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.603 |
| SRR1783600 | control | 16.256 |
| SRR1783602 | moderate drought stress | 5.690 |
| SRR1811619 | moderate drought stress | 5.673 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.686 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.233 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.298 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.394 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.266 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.813 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.126 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.125 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.064 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.197 |
| SRR2967015 | Control (Tissue:root) | 0.070 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.502 |
| SRR9715740 | Leave | 0.057 |
| SRR9715741 | Leave | 0.159 |
| SRR9715739 | Root | 0.979 |
| SRR9715742 | Root | 1.503 |
| SRR9715743 | Root | 1.272 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 13.699 |
| SRR8400027 | Control-Root | 12.784 |