Gene detail information of Glyur000601s00025452.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G20860.14.00E-116NIMA-related kinase 5
NRXP_006588915.10PREDICTED: serine/threonine-protein kinase Nek7-like isoform X1 [Glycine max]
COGNP_868885.17.00E-22serine/threonine-protein kinase [Rhodopirellula baltica SH 1]
Swissprottr|Q9LT35|NEK6_ARATH1.00E-135Serine/threonine-protein kinase Nek6
trEMBLtr|K7LIB3|K7LIB3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G12361.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006013949647017-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.1.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000601s00025452.2PF00069.20Pkinase92455.40E-52


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control33.156
SRR1783600control33.263
SRR1783602moderate drought stress32.251
SRR1811619moderate drought stress32.431

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.794
DRR006520Root Summer glycyrrhizin high producing strain21.250
DRR006521Root Winter glycyrrhizin high producing strain9.253
DRR006522Root Winter glycyrrhizin high producing strain9.162
DRR006523Root Summer glycyrrhizin low producing strain22.222
DRR006524Root Summer glycyrrhizin low producing strain21.939
DRR006525Leaf Summer glycyrrhizin high producing strain17.107
DRR006526Leaf Summer glycyrrhizin high producing strain17.143

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)37.114
SRR2868004Drought Stress(Tissue:root)37.129
SRR2967015Control (Tissue:root)36.824

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.746
SRR9715740Leave21.902
SRR9715741Leave23.779
SRR9715739Root1.696
SRR9715742Root9.537
SRR9715743Root8.572

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.565
SRR8749028MeJA induced 9h17.448
SRR8749029MeJA induced 9h13.753
SRR8749030Uninduced6.298
SRR8749031Uninduced1.969
SRR8749032Uninduced2.363

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root30.529
SRR8400027Control-Root32.162

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved