Gene detail information of Glyur000603s00029236.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G69310.21.00E-22WRKY DNA-binding protein 57
NRXP_007157586.12.59E-86hypothetical protein PHAVU_002G081600g [Phaseolus vulgaris]
Swissprottr|Q9C983|WRK57_ARATH3.00E-31Probable WRKY transcription factor 57
trEMBLtr|V7CJV1|V7CJV1_PHAVU1.00E-86Uncharacterized protein {ECO:0000313|EMBL:ESW29580.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0060384748103754+


Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000603s00029236.1PF03106.10WRKY1131502.70E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.999
SRR1783600control20.691
SRR1783602moderate drought stress25.859
SRR1811619moderate drought stress25.352

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.045
DRR006520Root Summer glycyrrhizin high producing strain22.788
DRR006521Root Winter glycyrrhizin high producing strain21.401
DRR006522Root Winter glycyrrhizin high producing strain20.857
DRR006523Root Summer glycyrrhizin low producing strain51.669
DRR006524Root Summer glycyrrhizin low producing strain51.652
DRR006525Leaf Summer glycyrrhizin high producing strain0.726
DRR006526Leaf Summer glycyrrhizin high producing strain0.802

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.497
SRR2868004Drought Stress(Tissue:root)9.064
SRR2967015Control (Tissue:root)13.395

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.591
SRR9715740Leave1.580
SRR9715741Leave4.114
SRR9715739Root15.023
SRR9715742Root19.318
SRR9715743Root17.525

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h29.858
SRR8749028MeJA induced 9h24.071
SRR8749029MeJA induced 9h30.899
SRR8749030Uninduced43.604
SRR8749031Uninduced36.189
SRR8749032Uninduced34.732

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.721
SRR8400027Control-Root17.802

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved