Gene detail information of Glyur000604s00024567.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G38460.23.00E-157ALG6, ALG8 glycosyltransferase family
NRXP_004516676.10PREDICTED: probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase-like [Cicer arietinum]
Swissprottr|Q9FF17|ALG6_ARATH0Probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase
trEMBLtr|I1LX18|I1LX18_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G07560.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006047606281733+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT57


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03848ALG6 EC:2.4.1.267 N-Glycan biosynthesis map00510


Gene Ontology

cellular_component

GO:0005789  endoplasmic reticulum membrane


molecular_function

GO:0016758  transferase activity, transferring hexosyl groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000604s00024567.1PF03155.10Alg6_Alg8335151.00E-124


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.790
SRR1783600control3.860
SRR1783602moderate drought stress5.252
SRR1811619moderate drought stress5.547

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.084
DRR006520Root Summer glycyrrhizin high producing strain5.488
DRR006521Root Winter glycyrrhizin high producing strain6.403
DRR006522Root Winter glycyrrhizin high producing strain6.145
DRR006523Root Summer glycyrrhizin low producing strain7.408
DRR006524Root Summer glycyrrhizin low producing strain7.587
DRR006525Leaf Summer glycyrrhizin high producing strain2.530
DRR006526Leaf Summer glycyrrhizin high producing strain2.527

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.701
SRR2868004Drought Stress(Tissue:root)11.277
SRR2967015Control (Tissue:root)11.646

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.396
SRR9715740Leave5.946
SRR9715741Leave5.226
SRR9715739Root2.708
SRR9715742Root3.521
SRR9715743Root2.756

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.621
SRR8749028MeJA induced 9h6.214
SRR8749029MeJA induced 9h2.111
SRR8749030Uninduced3.087
SRR8749031Uninduced1.611
SRR8749032Uninduced1.787

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.543
SRR8400027Control-Root8.949

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved