Gene detail information of Glyur000604s00024571.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G02550.12.00E-79LOB domain-containing protein 41
NRXP_004516674.12.56E-136PREDICTED: LOB domain-containing protein 41-like [Cicer arietinum]
Swissprottr|Q9M886|LBD41_ARATH1.00E-99LOB domain-containing protein 41
trEMBLtr|I1N6Q1|I1N6Q1_SOYBN2.00E-133Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G06280.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00604108341110009-


Gene family

Gene familysubfamily
Transcription Factors FamilyLOB
EAR motif-containing ProteinsLOB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000604s00024571.1PF03195.9DUF26041072.10E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.726
SRR1783600control4.721
SRR1783602moderate drought stress2.119
SRR1811619moderate drought stress2.146

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.339
DRR006520Root Summer glycyrrhizin high producing strain14.361
DRR006521Root Winter glycyrrhizin high producing strain486.344
DRR006522Root Winter glycyrrhizin high producing strain475.100
DRR006523Root Summer glycyrrhizin low producing strain3.738
DRR006524Root Summer glycyrrhizin low producing strain3.558
DRR006525Leaf Summer glycyrrhizin high producing strain1.262
DRR006526Leaf Summer glycyrrhizin high producing strain1.240

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.463
SRR2868004Drought Stress(Tissue:root)7.038
SRR2967015Control (Tissue:root)9.792

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.507
SRR9715740Leave5.504
SRR9715741Leave2.519
SRR9715739Root77.441
SRR9715742Root41.296
SRR9715743Root49.536

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h129.784
SRR8749028MeJA induced 9h137.809
SRR8749029MeJA induced 9h104.274
SRR8749030Uninduced16.240
SRR8749031Uninduced19.490
SRR8749032Uninduced50.413

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.529
SRR8400027Control-Root50.769

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved