Gene detail information of Glyur000605s00024909.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G14070.11.00E-91acyl-activating enzyme 15
NRXP_003524920.12.97E-162PREDICTED: probable acyl-activating enzyme 16, chloroplastic-like isoform X1 [Glycine max]
COGYP_007172371.12.00E-42AMP-forming long-chain acyl-CoA synthetase [Dactylococcopsis salina PCC 8305]
Swissprottr|Q8W471|AAE15_ARATH4.00E-114Long-chain-fatty-acid--[acyl-carrier-protein] ligase AEE15, chloroplastic (Precursor)
trEMBLtr|I1K3R5|I1K3R5_SOYBN1.00E-162Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G28390.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00605237029-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01897ACSL, fadD EC:6.2.1.3 Fatty acid metabolism map01212
Fatty acid biosynthesismap00061
Fatty acid degradationmap00071
Peroxisomemap04146
Quorum sensingmap02024
Adipocytokine signaling pathwaymap04920
PPAR signaling pathwaymap03320


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000605s00024909.1PF00501.23AMP-binding1103313.30E-39
Glyur000605s00024909.1PF00501.23AMP-binding3324515.50E-29


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.280
SRR1783600control2.446
SRR1783602moderate drought stress2.277
SRR1811619moderate drought stress2.305

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.545
DRR006520Root Summer glycyrrhizin high producing strain0.360
DRR006521Root Winter glycyrrhizin high producing strain0.534
DRR006522Root Winter glycyrrhizin high producing strain0.451
DRR006523Root Summer glycyrrhizin low producing strain3.466
DRR006524Root Summer glycyrrhizin low producing strain3.843
DRR006525Leaf Summer glycyrrhizin high producing strain0.251
DRR006526Leaf Summer glycyrrhizin high producing strain0.518

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.000
SRR2868004Drought Stress(Tissue:root)0.042
SRR2967015Control (Tissue:root)0.011

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.558
SRR9715740Leave1.791
SRR9715741Leave4.132
SRR9715739Root0.638
SRR9715742Root1.492
SRR9715743Root1.467

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.124
SRR8749028MeJA induced 9h0.217
SRR8749029MeJA induced 9h0.094
SRR8749030Uninduced0.084
SRR8749031Uninduced0.405
SRR8749032Uninduced0.093

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.114
SRR8400027Control-Root5.955

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved