Gene detail information of Glyur000605s00024924.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G06710.12.00E-48homeobox from Arabidopsis thaliana
NRXP_003523637.11.12E-86PREDICTED: homeobox-leucine zipper protein HOX19-like [Glycine max]
Swissprottr|P46665|HAT14_ARATH8.00E-59Homeobox-leucine zipper protein HAT14
trEMBLtr|K7KI54|K7KI54_SOYBN4.00E-87Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G05200.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006059097992972+


Gene family

Gene familysubfamily
Transcription Factors FamilyHB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000605s00024924.1PF00046.24Homeobox1391934.60E-17
Glyur000605s00024924.1PF02183.13HALZ1952331.90E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.512
SRR1783600control9.945
SRR1783602moderate drought stress8.391
SRR1811619moderate drought stress8.348

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.109
DRR006520Root Summer glycyrrhizin high producing strain20.743
DRR006521Root Winter glycyrrhizin high producing strain3.544
DRR006522Root Winter glycyrrhizin high producing strain3.010
DRR006523Root Summer glycyrrhizin low producing strain37.617
DRR006524Root Summer glycyrrhizin low producing strain37.879
DRR006525Leaf Summer glycyrrhizin high producing strain6.197
DRR006526Leaf Summer glycyrrhizin high producing strain6.310

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)25.073
SRR2868004Drought Stress(Tissue:root)56.486
SRR2967015Control (Tissue:root)48.239

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.117
SRR9715740Leave18.629
SRR9715741Leave24.110
SRR9715739Root0.760
SRR9715742Root11.292
SRR9715743Root8.115

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.903
SRR8749028MeJA induced 9h31.240
SRR8749029MeJA induced 9h26.262
SRR8749030Uninduced42.461
SRR8749031Uninduced69.081
SRR8749032Uninduced24.699

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root29.027
SRR8400027Control-Root17.341

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved